Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00463 ATGGAGAGTGATATGTACACTGCTGCACTGGACATTTCTGGGCGAGAGGCTACAGTAATAGATGAAATTTCCCAACATTCCGCCTCAAATCCTCTCATTCAGTGCTATTCACTTGACCTTAACAACCAATCCCACATCATAAGTGGAATTTCAATGCTTTCTGGAGAGCAAGGTGAACCCATAAATAATGTCCATGCTGATGCTTGCTTCATTAATCCTTCAATTATTGCTGACTCTAGTCCACTAGTTATATCACAAGGAAAGACTATTGTGGCAGTGGGAGATGCCTCAAATCCTATGGAGAACACTGAGCTTCAAGAGCATTTAGCTGGAGGAATGCCAATCACTCCCTCTTCACTTGCTGCCATTCTTGCTGCTAGAACTGGTCTTGAAGAAAATTTGGGGAACTCATCATCAGCCTTGCCTCCCTCCCTCTGCTCAATGGGGGCACTGGGGGCATTCTTCAACAATTTGCAAGGTACTTCAAATTCAAACCCTTTGTCTGCAACTTTTGAGGACTGTGGTTACAATGAAGTTTCTAGTAAGTGGAATGCTAACAAGTTTCCTAAAGCTCCAGAGATTGATGGAACTTGTCAGCCTTATCCTTTTATAGCAAATCTGGATCAAAATGAATGGCCATCATCAAATGTCGCAAACATGGCCAATCATGCTTACCATTCCTCACACTTTAGTAAGGAACTTTCTCTAAGTCTCGCAACATCGACAACCGCGGGAATGTGCTCGGAGGTGAGTTGCTCTAATGTGACCCCATGCATGAATGGAACCATGTCAGGGTTGGAGCAAGCCTCTTGCAGTAGTAGTAGGGAACTTTCTATGAATTTGGGTGGTAATAAGTATGTAGAGTTTTCACCAGAAGTACTGGAATCAAGATATCTCGTTGGGATTCAAGAGATACTTGCTCAAATTGGAAGATATTCATTTGAAAATCTAGAACAGTTGAATTATTCTGCTGGTAACCATAGATCAGGTGGAAACAAGTCAAGTTCAGCCTTCCCACCCAAGAGAAGGATATTGATAGATCACAATGCAAATTCTACATATGAAGCTCATGCAGAGTCTCCATTGCAAAGGCATGCTGCTGAATCAAAGAAATCCCAACTCCTGACACTTCTACAACTGGTGGACAATCGATATAGCCAATGCTTGGATGAGATACACACTGTTGTATCTGCATTCCAGGCCGCTACGGAGCTGGACCCTCAAATACATGCACATTTTGCTCTTCAAACCATCTCTATCCTTTACAGGGACCTAAGAGAGAGGATCAGCAATTACATTCTAGCCATGGGATCAAATTTCAACAACTCGTGCTCAGAAGAGAATGAATGGTCCGTTGAAACTTCATTCCTTCAAAAGCAATGGGCTCTCCAGCAGTTGAAAAGAAAAGATCAGTTGTGGAGGCCCCAAAGAGGGTTGCCAGAAAGATCCGTCTCGGTTCTACGGGCTTGGATGTTTCAGAATTTCCTGCACCCGTATCCTAAAGATGCAGAGAAGCATTTACTTGCAGTAAAAAGTGGGTTGACGAGAAGTCAGGTATCCAATTGGTTTATAAATGCTCGTGTTCGGCTGTGGAAACCTATGATTGAAGAGATGTATGCTGAAATGAATAAAAGAAAGGCCTGTCGAAATGAAGAAGGAATGCAGAGCAACCACGGAACTAGGATAAGCACGACCAATGAAAGGTTTAATCAGTGTCAACTATAG 1725 0.4284 MESDMYTAALDISGREATVIDEISQHSASNPLIQCYSLDLNNQSHIISGISMLSGEQGEPINNVHADACFINPSIIADSSPLVISQGKTIVAVGDASNPMENTELQEHLAGGMPITPSSLAAILAARTGLEENLGNSSSALPPSLCSMGALGAFFNNLQGTSNSNPLSATFEDCGYNEVSSKWNANKFPKAPEIDGTCQPYPFIANLDQNEWPSSNVANMANHAYHSSHFSKELSLSLATSTTAGMCSEVSCSNVTPCMNGTMSGLEQASCSSSRELSMNLGGNKYVEFSPEVLESRYLVGIQEILAQIGRYSFENLEQLNYSAGNHRSGGNKSSSAFPPKRRILIDHNANSTYEAHAESPLQRHAAESKKSQLLTLLQLVDNRYSQCLDEIHTVVSAFQAATELDPQIHAHFALQTISILYRDLRERISNYILAMGSNFNNSCSEENEWSVETSFLQKQWALQQLKRKDQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKRKACRNEEGMQSNHGTRISTTNERFNQCQL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00463 574 MobiDBLite consensus disorder prediction 553 574 - -
Gma06g00463 574 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 10 568 - -
Gma06g00463 574 Pfam Associated with HOX 293 430 IPR006563 -
Gma06g00463 574 SMART prehox3 287 431 IPR006563 -
Gma06g00463 574 SMART HOX_1 473 537 IPR001356 GO:0003677
Gma06g00463 574 SUPERFAMILY Homeodomain-like 475 542 IPR009057 -
Gma06g00463 574 MobiDBLite consensus disorder prediction 551 574 - -
Gma06g00463 574 CDD homeodomain 473 534 IPR001356 GO:0003677
Gma06g00463 574 Pfam Homeobox KN domain 490 529 IPR008422 GO:0003677|GO:0006355
Gma06g00463 574 ProSiteProfiles 'Homeobox' domain profile. 470 533 IPR001356 GO:0003677
Gma06g00463 574 PANTHER HOMEOBOX PROTEIN ATH1 10 568 - -
Gma06g00463 574 Gene3D - 476 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00463 Gma-Chr6 3958789 3960808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00463 233 546 Homeobox Transcription Factor Family AT4G32980 56.289 1.37e-103 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma06g00463 POX 7.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00463 - - gmx:100806862 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00463 06 3958789 3960808 Gma06g00463 06 3958789 3960808 ECH
Gma04g00469 04 4195734 4197885 Gma06g00463 06 3958789 3960808 GST
Gma17g02199 17 39700949 39703872 Gma06g00463 06 3958789 3960808 PCT
Gma06g00463 06 3958789 3960808 Gma17g02199 17 39700949 39703872 PCT