Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00457 ATGGGTATCTGCATATCCTCTGAATCTTCAGCGATTCATGGAGCCCCTGAAGAGGCTCGTGATGAAAATGTGTTAGTGTTTGAAGCAACCAAGGTTCTAAGTGGACTTTGCTCTGCTTACACTAAACAAGGTAGCAAAGGACTTAACCAAGATGCTGCCACTCTTTTTCAGGGTTATGGAACGGAAAACGCAGCATTTTGTGGCGTATTTGATGGGCATGGAAAGAATGGTCACATAGTAAGCAAAATAGTAAACAGCCGTTTGTCTCCGCTCATATTGAGCCAAAAGAAAGTGCATGCAAAGATTGACACGGTTCAAAAGGGTGATAAAATAAACCATGTGGACACAGATGAAGACAATTCATCAGCTCCAAACACGAATTGTCATGAATGGAAAGAGGCTATTCTTGATGCTTTCAGGGTGATGGAAAAGGAGCTCAAGCTACAAGAGAATATAGATTCCACTTGCAGTGGAACCACGGCTGTAGTTGTCATAAGACAGGGTGAAGATCTTGTCATAGCAAACCTTGGTGACTCGAGAGCAATCTTGGGGACAATCTCTGACGGTGAAATCATACCCATTCAATTGACAACGGATATGAaacctggattacctcGCGAGGCAGAACGAATAAGAAGTTGCAACGGTCGTGTATTTGCGCTGAAGGAAGAACCACACATCCAGAGAGTGTGGTTACCCAATGAGAACTCACCAGGCCTAGCCATGTCTCGAGCTTTTGGAGATTTCATGCTCAAAGACCATGGCATCATTGCCGTCCCAGATATTTCATATCGCACGCTGACATCCAGCGACCAGTTTGTTGTACTTGCAAGTGATGGGGTGTGGGATGTACTAAGCAACAAGGAGGTTTCCTCAGTTGTGTGGGAGGCAGACACTGAAAAAGATGCAGCAAGGGCAGTAGTGGAAGCAGCAACCGCAGCATGGAAACAAAAGTATCCTTCTTCTAAGGTAGATGACTGCACTGTGCTTTGCCTCTTCCTCCACAAGAAACCACAGTTTCTTGGTAACTAA 1032 0.4428 MGICISSESSAIHGAPEEARDENVLVFEATKVLSGLCSAYTKQGSKGLNQDAATLFQGYGTENAAFCGVFDGHGKNGHIVSKIVNSRLSPLILSQKKVHAKIDTVQKGDKINHVDTDEDNSSAPNTNCHEWKEAILDAFRVMEKELKLQENIDSTCSGTTAVVVIRQGEDLVIANLGDSRAILGTISDGEIIPIQLTTDMKPGLPREAERIRSCNGRVFALKEEPHIQRVWLPNENSPGLAMSRAFGDFMLKDHGIIAVPDISYRTLTSSDQFVVLASDGVWDVLSNKEVSSVVWEADTEKDAARAVVEAATAAWKQKYPSSKVDDCTVLCLFLHKKPQFLGN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00457 343 Gene3D - 24 337 IPR036457 -
Gma06g00457 343 CDD PP2Cc 37 334 IPR001932 -
Gma06g00457 343 SMART PP2C_4 26 332 IPR001932 -
Gma06g00457 343 PANTHER ALPHABET, ISOFORM E-RELATED 1 339 - -
Gma06g00457 343 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 339 - -
Gma06g00457 343 SUPERFAMILY PP2C-like 33 336 IPR036457 -
Gma06g00457 343 Pfam Protein phosphatase 2C 85 312 IPR001932 -
Gma06g00457 343 ProSiteProfiles PPM-type phosphatase domain profile. 36 334 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00457 Gma-Chr6 3926315 3928303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00457 1 339 PP2C-type Phosphatase Gene Family AT5G26010 51.576 8.25e-105 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00457 - - gmx:100795893 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00457 06 3926315 3928303 Gma06g00457 06 3926315 3928303 ECH
Gma17g02204 17 39765272 39769599 Gma06g00457 06 3926315 3928303 PCT
Gma06g00457 06 3926315 3928303 Gma17g02204 17 39765272 39769599 PCT