Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00441 ATGGGTGATCTTGAAAATGCATTGGGGCTTCAAAGTGTTTCAGAAATGACAGTTAGTTCTGCCTCTATGGCTATGCCTTCAGGCGCGGCTAATCCTTTTCTTTCTTCTTCCGCTTGGGATCCACTTGTTCCTTTGAGTCAAACTTTTGGAGGCTCTCTCGTGGTTTCTCATAGTGAGTTTGCCCATTCAGCTTACCCTTTTGTTATGAACTGTGACTCTCACTTTGTTCAATATGTATCTGACTCAAATTTTGAGCACATGGCCCTTAAGGTTCCCTCCATTGGCCAAACGGGTTGTTATGATATAGATAATAACATAGGGTATCTGCCAAATCATAATCCGAGTAATGAGTCTGGAATAGAAAGGAATCAATTAAATAATGAGAAATCTAAGCACGAAGATTCTACTTCTGAAGAAGGAGCTGCACCTGGTGAACATAAAAGAAAACGAGGACTTTACTATAATGTTACTTTCAGTTCAAATAAGAATGCTGAGGGGGAAACACTTCAAAATTCTTCTGGGAAGAGCTGTGATGATGTGAAAGAACAATGTGAAAAGAAACCAAAATTTGCACAAAATAGTGCAGCTAACTTATGTGGAAAGCAATTGCTGAAGCACAAGAAAGATGACTCCGAGAGTGAAGAAGCTCCCAAAGAAAATTTCATTCATGTGAGAACCCGAAGAGGTCAAGCTACAAACAGTCACAACCTTGCAGAAAGGgtaaggagagaaaagattagtgagcgaatgaggttgcttcaagaacttgttCCAGGATGCGAAAAGATAACGGGTAAAGCGGTAATGCTGGATGAGATTATAAACTATGTGCAATTACTGCAACAACAGGTTGAGatccgttccaaagattcacgcattggacatgcacctattggtggatatggtgccagcatcaGCATGCCTAGCCAATCAAACACAATTCCTTCCAATGCCACAGctcttgacaatttgggaaccagtggatgcttgaaaacagagttatag 1005 0.3413 MGDLENALGLQSVSEMTVSSASMAMPSGAANPFLSSSAWDPLVPLSQTFGGSLVVSHSEFAHSAYPFVMNCDSHFVQYVSDSNFEHMALKVPSIGQTGCYDIDNNIGYLPNHNPSNESGIERNQLNNEKSKHEDSTSEEGAAPGEHKRKRGLYYNVTFSSNKNAEGETLQNSSGKSCDDVKEQCEKKPKFAQNSAANLCGKQLLKHKKDDSESEEAPKENFIHVRTRRGQATNSHNLAERVRREKISERMRLLQELVPGCEKITGKAVMLDEIINYVQLLQQQVEIRSKDSRIGHAPIGGYGASISMPSQSNTIPSNATALDNLGTSGCLKTEL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00441 334 MobiDBLite consensus disorder prediction 124 151 - -
Gma06g00441 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 230 280 IPR011598 GO:0046983
Gma06g00441 334 Gene3D - 227 293 IPR036638 GO:0046983
Gma06g00441 334 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 11 288 IPR024097 GO:0006355
Gma06g00441 334 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 288 - -
Gma06g00441 334 Pfam Helix-loop-helix DNA-binding domain 233 281 IPR011598 GO:0046983
Gma06g00441 334 MobiDBLite consensus disorder prediction 110 151 - -
Gma06g00441 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 227 288 IPR036638 GO:0046983
Gma06g00441 334 SMART finulus 236 286 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00441 Gma-Chr6 3767152 3769603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00441 24 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.948 4.09e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma06g00441 HLH 3.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00441 - - gmx:102662483 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00441 06 3767152 3769603 Gma06g00441 06 3767152 3769603 ECH