Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00419 ATGTTGTGCGCTTGTTCTTCCGGGGAGCAGTTCAAATTCGAAGAGCCGCCACACTCGCCGGAGTCCCTCGCCACCAGGGATTTCTCCGCCAGCGGACTCTCTTCCAGGACCGGAGAATGGGAACCTAAATTCGATGATACGCAAGTTGAAGAAGCTGAATCTACTCTTAAAGATGCTCTTTCCTTAAACTACGAGGAGGCTAGGGCTTTGTTGGGGAGGCTTGAATACCAGAGAGGGAACTTTGATGCTGCACTTCAAGTGTTTCAAGGTATAGATATCAAGGGTTTGACCCCAAGAATGATCAAGGCTATTGCTGAAAGAACCAAGCAAAGAAAACTGCGTCCCAAGGCAGATATGGTGGTTCCGAATGTCATGTCATTGCATTCGGTTAGCCTGCTTCTTGAGGCAATTTTGCTTAAATCAAGATCATTGGAGGAACTTGGGCAATGCATTGAGGCTGCAAAGGAGTGCAGAATAATTTTGGATACGGTTGAATCTGCCCTTCCCAATGGAATGCCTGAGGGTATTGGTGAAGGTTGTAAGTTGCAAGAGATGTTTCATAAAGCATTGGAGTTGTTTCCAAGCCTTTGGATCAAGGCAGGGTTTCTTGATGAAGCTGTCACTGCATATCGTCGTGCTCTTGTCAAGCCTTGGAATTTGGAGCCAAGAAAGTTGGCTGCTGTAGAAAAAGATTTAGCTATGATACTACTCTATGGTGGTGTTGAAGTAAGCCTACCCTCTCAGTTGCAGGTGTGGGGTAAAACAGCACCCAAGAGTAGTGCTGAAGAAGCAATACTTTTGCTATTAATACTCATGAGCAAGGTGGCAATTCGGGAAATAGACTGGGATGCTGAAATAATGGATCATCTTACTTTTGCACTTTCAGTGACTGGGATGTTTGAGTTATTGGCAGATCATGTAGAGCAGATCCTTCCAGGTATTTATGGTCGAGCTGAGAGGTGGTACTTTCTTGCTCTGTGTTATAGTGCAGCAGGACATGATGGGGTAGCATTGAACCTTTTGAGGAAGGCTTGTGGCAGTTCTGAAGCAAACCATAGACCCCATTTTCCTTCATTTTTGTTTGGAGCAAAACTCTGTTCCTTGGATCCTCACCATGCTCATGAAGGCATTAAATTTTCACGTGAAGTTATTGTTATAGCTAAGCAACAAAATGAACATTTTCTCAGTCAAGGTCATAAATTTCTTGGCATCTGCTACGGGGCTGCTGCTAGAATTTCTGTACTGGATTCTGAAAGAAGTATATTTCAAAGAGAGTCTTTGGACTCTCTAAACTGTGCTGCTGTAAATGGAAGTGATGACCTGGAAGCGATAGTCAGCCTCGGACTAGAAAATGCCATTCAAAGGAATCTGGATGCAGCTTACAACAATATAATGATGTACTCAGACATGACTGTTGGCAGTTCAAGAGGTTGGCAGCTATTAGCACTCATAATATCTGCACAGCAGCGGTTTAAGGATGCTGAAACTATAGTTGATTTTGCTTTAGATGATTCTGGGGGGATGGATCAACTTGAACTTCTAAGATTGAAAGCAGTGCTTCAAATTTCTCAGCAGCAACCCAAGGAAGCAATAGAGACATATAGGATCTTGCTAGCACTAATTCAAGCAAAAAAGGAGCTTTTGCTTCAAGATAAAAACATTGATCAAGAACAAGCATTCAGGCATGAGGCATTAACAGAAAGGAAGTTGGAAATGGAAGCCTGGCAGGATTTGGCTACCATTTATACAGATATTGGTTCCTTGCTTGATGCAAAAACTTGTGTTGACAAAGCCCGGTTGATAGAGTATTTCTCTCCAAGATGTTGGCATATTACAGGGATGTTGCTTGAAGCTCAATCATTATACAAAGAGGCATTTGTTTCCTTTTCAGTATCATTGTCAATAGAACCAGATTACATTCCCGGTATCATTTCCACTGCAGAATTGTTGATGAAACTTGTTGTAGTAAAGACCCTTTGTTCATCTCCGGAACAAGGAAAGCTGGCCGTGCAGAGGATTTGA 2022 0.4283 MLCACSSGEQFKFEEPPHSPESLATRDFSASGLSSRTGEWEPKFDDTQVEEAESTLKDALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIKGLTPRMIKAIAERTKQRKLRPKADMVVPNVMSLHSVSLLLEAILLKSRSLEELGQCIEAAKECRIILDTVESALPNGMPEGIGEGCKLQEMFHKALELFPSLWIKAGFLDEAVTAYRRALVKPWNLEPRKLAAVEKDLAMILLYGGVEVSLPSQLQVWGKTAPKSSAEEAILLLLILMSKVAIREIDWDAEIMDHLTFALSVTGMFELLADHVEQILPGIYGRAERWYFLALCYSAAGHDGVALNLLRKACGSSEANHRPHFPSFLFGAKLCSLDPHHAHEGIKFSREVIVIAKQQNEHFLSQGHKFLGICYGAAARISVLDSERSIFQRESLDSLNCAAVNGSDDLEAIVSLGLENAIQRNLDAAYNNIMMYSDMTVGSSRGWQLLALIISAQQRFKDAETIVDFALDDSGGMDQLELLRLKAVLQISQQQPKEAIETYRILLALIQAKKELLLQDKNIDQEQAFRHEALTERKLEMEAWQDLATIYTDIGSLLDAKTCVDKARLIEYFSPRCWHITGMLLEAQSLYKEAFVSFSVSLSIEPDYIPGIISTAELLMKLVVVKTLCSSPEQGKLAVQRI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00419 673 PANTHER PROTEIN NPG1 1 653 IPR043376 -
Gma06g00419 673 Gene3D Tetratricopeptide repeat domain 479 658 IPR011990 GO:0005515
Gma06g00419 673 MobiDBLite consensus disorder prediction 1 44 - -
Gma06g00419 673 Gene3D Tetratricopeptide repeat domain 43 345 IPR011990 GO:0005515
Gma06g00419 673 SUPERFAMILY TPR-like 319 640 IPR011990 GO:0005515
Gma06g00419 673 PANTHER PROTEIN NPGR1 1 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00419 Gma-Chr6 3587798 3592154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00419 1 652 Calmodulin-binding Proteins AT1G27460 58.295 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00419 K21843 - gmx:100799251 1271.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00419 06 3587798 3592154 Gma06g00419 06 3587798 3592154 ECH
Gma04g00428 04 3719509 3723129 Gma06g00419 06 3587798 3592154 GST
Gma17g02256 17 40404499 40409353 Gma06g00419 06 3587798 3592154 PCT
Gma14g00782 14 8116418 8119436 Gma06g00419 06 3587798 3592154 PCT
Gma06g00419 06 3587798 3592154 Gma17g02256 17 40404499 40409353 PCT
Gma06g00419 06 3587798 3592154 Gma14g00782 14 8116418 8119436 PCT