Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00409 ATGCGGGTTGTTTGTTGCTCCAATTCAGGCGTGAGTGCCACTCTTCCATCTTTCCCTTGTCCCAGATTCCCTCCACTCATTGCAATTTCTTCGATCCGCTTTCTAAATTCCACACCCCTCCGTTCCACTGCTTCGCCGCGACAAGTTACAAGAATGGCTTCGAAGAATGCTCAACAAGACACGCGCTTAGCCAGAATCGCCTCTGCGATCCGAGTCATCCCCGACTTTCCTAAGCCAGGAATTTTGTTTCAGGACATAACCACGCTGCTTCTTGATACAAAGGCTTTCAAAGACACCGTTGACTTGTTTGTTGAGAGGTACAGAGATCAAAACATCAATGTTGTCGCAGGAGTTGAAGCAAGGGGCTTTATATTTGGTCCACCCATTGCATTAGCTATTGGAGCAAAATTTGTCCCCATGAGGAAACCCAATAAATTGCCTGGGGAGGTTATCTCAGAAGAGTATTCTTTGGAGTATGGAACAGACAAAATGGAGATGCATGTAGGGGCTGTACAACCTGGAGAACGAGCCTTAATCATAGATGATCTTATTGCCACTGGGGGAACGTTAGGTGCAGCAATTAAGCTTCTAGAACGTGTTGGGGTGCATGTTGTGGAGTGTGCTTGTGTGATTGAATTACCAGAGTTAAAGGGGCGGGATAGGCTGGGAGACAAGTCGCTGTTTGTCTTGATTAAAGGGGGAGCCTGA 708 0.4703 MRVVCCSNSGVSATLPSFPCPRFPPLIAISSIRFLNSTPLRSTASPRQVTRMASKNAQQDTRLARIASAIRVIPDFPKPGILFQDITTLLLDTKAFKDTVDLFVERYRDQNINVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQPGERALIIDDLIATGGTLGAAIKLLERVGVHVVECACVIELPELKGRDRLGDKSLFVLIKGGA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00409 235 PANTHER ADENINE PHOSPHORIBOSYL TRANSFERASE, PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN-RELATED 52 232 - -
Gma06g00409 235 TIGRFAM apt: adenine phosphoribosyltransferase 67 231 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gma06g00409 235 Gene3D - 52 232 IPR029057 -
Gma06g00409 235 Pfam Phosphoribosyl transferase domain 91 229 IPR000836 -
Gma06g00409 235 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 52 232 - -
Gma06g00409 235 Hamap Adenine phosphoribosyltransferase [apt]. 66 233 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gma06g00409 235 SUPERFAMILY PRTase-like 68 226 IPR029057 -
Gma06g00409 235 CDD PRTases_typeI 100 232 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00409 Gma-Chr6 3522391 3527193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00409 52 235 PRT Gene Family AT1G27450 80.435 3.78e-108 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00409 K00759 - gmx:100777103 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00409 06 3522391 3527193 Gma06g00409 06 3522391 3527193 ECH
Gma04g00420 04 3645879 3650560 Gma06g00409 06 3522391 3527193 GST