Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00397 ATGAGTGCTCCATCGCGAGAAGAGGAGTCGAAGGAGGAGGAGAGGGACGAGGAAGCGAACCGGCTTCTAGAAGAAGAAGAAGAAGCAGAATCATCATCAGAAGAGGGGGAGAAGATCCTGGTGGCGGATTTGGAGTTCGACAGGGTGGACGATGGGAGCGTTCCTCCTCCTTTCTCGTGGAAGAAGCTCTGGCTGTTCACGGGGCCTGGGTTCTTGATGAGCATAGCGTTTTTGGATCCAGGGAATCTAGAGGGGGATCTCCAGGCTGGGGCCATCGCGGGCTACTCGCTTCTATGGCTCCTCATGTGGGCCACCTTCATGGGCCTCTTGATCCAGCTTCTCTCCGCCAGGGTCGGCGTCGCCACGGGCCGCCACCTCGCCGAGCTCTGCAGGGACGAGTATCCCAATTGGGCCCGCCTCGTGCTCTGGTTCATGGCCGAGCTCGCCCTGATTGGCGCCGACATTCAAGAGGTTATTGGAAGTGCCATTGCCATCCAAATTCTCAGCCGCGGCTTCTTCCCTCTCTGGGCTGGAGTTCTAATCACTGCTTCAgATTGCTTTTTCTTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCGGTTCTCATCGCTGTTATGGGTCTTTCTTTTGCCTGGATGTTCGGTGATGCTCAACCTAATAGAAAAGAGCTTTTAATGGGTATTTTGGTTCCAAGACTAAGCTCGAAAACAATTCGTCAGGCTGTGGGTGTTGTGGGTTGTGTCATTATGCCTCACAATGTATTCCTGCATTCTGCTTTGGTGCAATCAAGGAAGGTTGATCCTAAAAAGATAGGTCGGGTGCAGGAGGCTCTCAACTACTATTCAATTGAATCGGCGGCGGCACTTGCAGTCTCCTTCATGATCAATCTATTTGTCACAACAGTTTTTGCTAAGGGTTTTTATGGAACAAAACAGGCAGATAGCATAGGATTGGTCAATGCAGGGCAGTATCTTGAAGAGAAGTATGGGGGAGGAGTCTTCCCTATTCTTTATATATGGGGGATTGGGTTATTGGCAGCTGGGCAGAGTAGCACCATCACTGGCACATATGCTGGCCAATTCATAATGGGGGGTTTCCTCAACCTTCGTTTAAAGAAATGGTTGAGAGCATTGATCACTCGAAGTTTTGCAATTGTGCCAACTATAATTGTAGCGATTGTTTTTAATAAATCAGAAGGCTCATTGGATGTTTTGAATGAATGGCTCAATGTGCTTCAGTCCATGCAAATTCCCTTTGCTCTAATTCCCCTCCTCACATTGGTCTCCAAAGAGAAGATCATGGGGACCTTTAGGGTTGGGCCTGTTCTTGAGAGAGTAGCATGGATTGTTGCTGGACTGATAATGATAATTAATGGATATCTCTTGTTAGATTTCTTCGTTTCTGAGGTGAATGGCATTTTGCTTGGTCTTTTAGCCTGCTCCTGCACAACAGCCTATATTGCATTCATTGTATATTTGGTTTCACAGAGCGGTATTCTTCCTTCTGCTTGGGTTAATCGTCTTCCCAAAGGATTTTCTTCTACTGGGAATTAA 1569 0.4774 MSAPSREEESKEEERDEEANRLLEEEEEAESSSEEGEKILVADLEFDRVDDGSVPPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGFFPLWAGVLITASDCFFFLFLENYGVRKLEAAFAVLIAVMGLSFAWMFGDAQPNRKELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKVDPKKIGRVQEALNYYSIESAAALAVSFMINLFVTTVFAKGFYGTKQADSIGLVNAGQYLEEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIIVAIVFNKSEGSLDVLNEWLNVLQSMQIPFALIPLLTLVSKEKIMGTFRVGPVLERVAWIVAGLIMIINGYLLLDFFVSEVNGILLGLLACSCTTAYIAFIVYLVSQSGILPSAWVNRLPKGFSSTGN 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00397 522 PRINTS Natural resistance-associated macrophage protein signature 142 168 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma06g00397 522 PRINTS Natural resistance-associated macrophage protein signature 172 191 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma06g00397 522 PRINTS Natural resistance-associated macrophage protein signature 197 218 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma06g00397 522 PRINTS Natural resistance-associated macrophage protein signature 246 269 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma06g00397 522 PRINTS Natural resistance-associated macrophage protein signature 353 372 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma06g00397 522 PRINTS Natural resistance-associated macrophage protein signature 381 398 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma06g00397 522 PRINTS Natural resistance-associated macrophage protein signature 415 434 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma06g00397 522 PANTHER BNAC08G04640D PROTEIN 24 511 - -
Gma06g00397 522 Hamap Divalent metal cation transporter MntH [mntH]. 49 471 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma06g00397 522 MobiDBLite consensus disorder prediction 1 36 - -
Gma06g00397 522 MobiDBLite consensus disorder prediction 19 33 - -
Gma06g00397 522 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 61 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma06g00397 522 Coils Coil 6 35 - -
Gma06g00397 522 MobiDBLite consensus disorder prediction 1 18 - -
Gma06g00397 522 Pfam Natural resistance-associated macrophage protein 84 445 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma06g00397 522 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 24 511 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00397 Gma-Chr6 3421654 3425676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00397 6 502 Inorganic Solute Cotransporters AT1G47240 80.120 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00397 K21398 - gmx:100795013 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00397 06 3421654 3425676 Gma06g00397 06 3421654 3425676 ECH
Gma04g00411 04 3569626 3574487 Gma06g00397 06 3421654 3425676 GST