Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00381 ATGAATTCCTACTTTCCTTGTATCGTAGCGTATGCAATGGACAAATCCACATTTGGCAGTGTGATCCCAACACACGAAAATCACTTGAGTTCTGAGGTTGGTCCAAGAATGGCGATTGATCCACACTTATTACTGTTCCTGCTTCTGGCCCCGTCAAACGCACATTGCTCCAAACTCCAACGCCGTCATCTTCCTCCCTTTGTTTTCACCGACGCAACCGCCCTCCTCGTCTTCAAACTAAAAGCCGACGTTAACAACCACCTTGACTTCTCCCCCCTCACGCGCGGCCTCCGCTTCTGCGCGTGGCATGGCGTGGAATGCAACGGCCCCAAAGTGCTGCGTCTCGTTCTCCAAAACTTAGATCTCGGAGGCGCGTGGGCTCCCAAAACACTCACGCGTCTCGACCAGCTCCGAGTCCTCAGCTTGCAGAACAACTCACTCACCGGACCCATTCCAGACCTCACCGGCCTCTTCAATCTCAAAAGTCTCTTCCTTGATAACAACCACTTCACCGCCTCTCTCCCTCCCTCACTCTTCTCTCTCCACCGTCTCCGAAACTTGGATTTCTCTCACAACAACTTCTCCGGACCTATTCCCACCGCCTTCACCACCCTAGACCGCCTCCACAGCCTCCTTTTAAGCTTCAACTCCTTCAACGGTTCAATCCCCCCGTTTAACCAATCCTCTCTCAAAATCTTCCGAGCCTCCGCCAACAACCTCTCCGGCGCGGTTCCCGTGACGCCGACGGTCTTCCGTTTTCCGCCTTCTTCCTTCGCGTTAAACCCTCAACTCTGCGGCGAAATCATCCGCGTACAATGCCGTCCCGCACAGCCTTTCTTCGGACCCGTGGCGCCGCCTACGGCTGCGCTCGGCCAGAACGCGCAGGTTCACGGCGTCAACGGAATTATCCGGCAGCCGTACGAGAAGAAGCGCCACGACCGGAGGGCGCTGATTATTGGGTTCTCGGCCGGGATATTCGTTCTGGTTTGCTCGCTGGCGTGCTTGGCGGCGGCGGTGAGGAAGCAGAGGAGTCGGAGCAAGAAGGACGAGAGGACGGGGATGATGGCGGCTGATGCGGCGGCGAGGGAGGAGGGCGCGGCGGTTATGCGGATGGAGATGGAGGAGAAAGTAAAGAGAGCGGAGGTGGCGAAGAGTGGGGGTGAGGCGCAGGTGTACACGCTGGAGCAGCTGATGAAAGGTTCGAGATCAAGCAGGGCAAGGCCATTGCATTGGACATCGTGCTTAAAAATAGCAGAGGACGTAGCACAAGGTCTGGCCTTCATCCACCAGGCATGGAGATTGGTCCATGGCAATCTCAAGTCCTCCAATGTTCTTCTTGGACCGGATTTTGAGGCATGCATTACTGATTACTGCCTTTCTGTGTTGACTCACCCATCCATATTCGATGAAGATGGGGACTCAGCAGCATACAGAGCTCCAGAAACTCGCAACCCCAATCATCACCCAACCCACAAATCCGATGTTTATGCGTATGGGATTTTGTTGCTTGAGCTTCTGACGGGGAAATTTCCCTCCGAGCTCCCATTCATGGTTCCTGGTGACATGTGA 1569 0.5507 MNSYFPCIVAYAMDKSTFGSVIPTHENHLSSEVGPRMAIDPHLLLFLLLAPSNAHCSKLQRRHLPPFVFTDATALLVFKLKADVNNHLDFSPLTRGLRFCAWHGVECNGPKVLRLVLQNLDLGGAWAPKTLTRLDQLRVLSLQNNSLTGPIPDLTGLFNLKSLFLDNNHFTASLPPSLFSLHRLRNLDFSHNNFSGPIPTAFTTLDRLHSLLLSFNSFNGSIPPFNQSSLKIFRASANNLSGAVPVTPTVFRFPPSSFALNPQLCGEIIRVQCRPAQPFFGPVAPPTAALGQNAQVHGVNGIIRQPYEKKRHDRRALIIGFSAGIFVLVCSLACLAAAVRKQRSRSKKDERTGMMAADAAAREEGAAVMRMEMEEKVKRAEVAKSGGEAQVYTLEQLMKGSRSSRARPLHWTSCLKIAEDVAQGLAFIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSVLTHPSIFDEDGDSAAYRAPETRNPNHHPTHKSDVYAYGILLLELLTGKFPSELPFMVPGDM 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00381 522 ProSiteProfiles Protein kinase domain profile. 315 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00381 522 Pfam Leucine rich repeat 159 217 IPR001611 GO:0005515
Gma06g00381 522 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 44 401 - -
Gma06g00381 522 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 400 522 - -
Gma06g00381 522 Gene3D Ribonuclease Inhibitor 181 266 IPR032675 -
Gma06g00381 522 SMART serkin_6 315 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00381 522 SUPERFAMILY Protein kinase-like (PK-like) 393 511 IPR011009 -
Gma06g00381 522 SUPERFAMILY L domain-like 69 245 - -
Gma06g00381 522 Gene3D Ribonuclease Inhibitor 70 180 IPR032675 -
Gma06g00381 522 Pfam Protein kinase domain 352 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00381 522 Gene3D Transferase(Phosphotransferase) domain 1 346 519 - -
Gma06g00381 522 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 44 401 - -
Gma06g00381 522 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 400 522 - -
Gma06g00381 522 ProSiteProfiles Leucine-rich repeat profile. 136 158 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00381 Gma-Chr6 3282644 3285242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00381 393 522 Receptor kinase-like Gene Family AT5G43020 62.500 1.11e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma06g00381 Pkinase 7.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00381 - - gsj:114414131 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00381 06 3282644 3285242 Gma06g00381 06 3282644 3285242 ECH
Gma04g00390 04 3368343 3371624 Gma06g00381 06 3282644 3285242 GST