Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00374 ATGATGAGTACCCATGTCGTTCGTCATGTTTCAGAATGCTTCGTCAAGCCACATTGTCCCGGCCAAGAGTCAAACCAAATATGCAACTTAACACCTTGGGATATTGCTATGCTGTCCGTCCACTACATCCAGAAGGGTCTGCTTTTCAAGAAGCCTCCAACAACACTTGTTGATCAACATGATTTCATTGAGAACCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTTCCATTTCTATCCTTTGGCTGGTCGCCTTGTAACTCAGAAAACCCAAGACCCTCCCTCATATGCTGTGCTTGTTGATTGCAACAACAATAGTGATGGAGCTAGATTCATCTATGCAACATTGGACATGACCATATCTGACATAATCTCTCCCATTGACGTCCCACCCATTGTTCACTCATTGTTTGACCACCACAAAGCAGTCAACCATGATGGCCACACCATGCCATTGTTGTCCATCCAAGTCACTCAACTAGTGGATGCTGTTTTTATAGGTTGTTCCATGAACCACGTTATTGGCGATGGCACTTCTTATTGGAATTTCTTTAACACGTGGTCTGAGATTTTTCAAGCTCAAGCTGAAGGGCATGAATATGATGTTCCCATTTCACACAATCCTATTCATAATCGCTGGTTTCCAGAGCTTTACGGTCCATTAATCAATCTTCCCTTCAAAAACCACGACGAGTTTATTAGCAGATTTGAATCGCCCAAGCTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCGAAGCTGAAAGCAAAGGCGAACAAGGAGTGCAATACCACCAAAATCTCTTCGTTCCAGTCATTATCAGCACTTGTTTGGAGATCCATAACTCGTGCGCGCTCAGTACCACAGGAGCAGAGAACAAGTTGCAAGCTGGCCACAGACAATCGATCAAGAATGGAACCACCTCTGCCTAAGGAATACTTTGGAAACTCGCTTCATGCGGTGAGTGGTGAGGCCACGACAAGGGAGTTGCTTGAGAATGGTTTGGGATGGGCAGCATGGAAGTTGCACCTTGCTGTTGCAAACCATAATGCCAGTGCTGTTTTGGATTTTCTCAAAGAGTGGTTAGAATCTCCTTTCATATATCAAATTGGTGGTTTTTTTGACCCCTACTGTGTGATGATGGGTAGCTCGCCAAGGTTCAACATGTATGGGAATGAGTTTGGAATGGGGAAAGCAGTGGCAGTTAGAAGTGGTTATGCCAACAAATTTGATGGCAAAGTGACATCATACCCTGGCCATGAAGGAGGGGGAAGCATTGATTTGGAAGTCTGTCTTTCACCGGATACAATGAGCGCGTTGGAATCAGACGACGAGTTCATGAGTGCAGTTTGCTAA 1371 0.4486 MMSTHVVRHVSECFVKPHCPGQESNQICNLTPWDIAMLSVHYIQKGLLFKKPPTTLVDQHDFIENLLEKLKHSLSLTLFHFYPLAGRLVTQKTQDPPSYAVLVDCNNNSDGARFIYATLDMTISDIISPIDVPPIVHSLFDHHKAVNHDGHTMPLLSIQVTQLVDAVFIGCSMNHVIGDGTSYWNFFNTWSEIFQAQAEGHEYDVPISHNPIHNRWFPELYGPLINLPFKNHDEFISRFESPKLRERIFHFSAESIAKLKAKANKECNTTKISSFQSLSALVWRSITRARSVPQEQRTSCKLATDNRSRMEPPLPKEYFGNSLHAVSGEATTRELLENGLGWAAWKLHLAVANHNASAVLDFLKEWLESPFIYQIGGFFDPYCVMMGSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGHEGGGSIDLEVCLSPDTMSALESDDEFMSAVC 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00374 456 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 454 - -
Gma06g00374 456 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 454 - -
Gma06g00374 456 Gene3D - 232 447 IPR023213 -
Gma06g00374 456 Gene3D - 2 225 IPR023213 -
Gma06g00374 456 Pfam Transferase family 14 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00374 Gma-Chr6 3188130 3189500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00374 68 446 Monolignol Biosynthesis Gene Families AT5G48930 28.212 3.58e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00374 - - gmx:100775661 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00374 06 3188130 3189500 Gma06g00374 06 3188130 3189500 ECH
Gma04g00382 04 3274667 3285775 Gma06g00374 06 3188130 3189500 GST