Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00367 ATGGAGCAGCAGCACATGGACATGATGACCATGATGATGTTGCAGCACCTCCCTGAATTCTCTGAACCATACACTCACACCATGGAAGGATTTCATCCCCCATCAGAAGAGTTCTGCGGTAACAACAACAACAATATACGCAACACTATGCAACTAGCAGATTTAATTGATAACAATAACCCTCTTAGTCCCATACCTTGGTCCTCCTCATACTCATTCACACACTTGCCAGCATCCACTACCGAAATCTCTTTCTCCAATAATAGCCATCCTACTACCCCAATAATGCTTCAAGAACACGAACAACAATATGAGGGTGCAAATGCAAACCCTTACGGAGGTGAGAAGCGGAACTCGATGGCGGCGATGAGGGAGATGATATTCAGAATGGCGGCGATGCAGCCGATACACATAGACCCGGAGTCGGTGAAGGCGCCGAAGCGGAGGAACGTGAAGATATCGAAGGATCCACAGAGCGTGGCGGCGCGGCACCGCAGAGAAAGGATAAGCGAGAGGATAAGGATACTGCAGAGACTGGTCCCCGGGGGAACTAAGATGGACACTGCTTCCATGTTGGATGAGGCCATTCACTACGTCAAGTTTCTCAAAACGCAGGTTCAGTCACTCGAACGCGCTTCCTCCGCTAACAACAATATCAGGCCACTTAACGCTGCAGGCCAGATAGGCTTCCCTGTTGCTTCCACCCCTTATTTTCCTCTGCCTAGTAAACCTTACCAAGCTCCAAACATGGACAATATGCACGATACATATCATTAA 777 0.4865 MEQQHMDMMTMMMLQHLPEFSEPYTHTMEGFHPPSEEFCGNNNNNIRNTMQLADLIDNNNPLSPIPWSSSYSFTHLPASTTEISFSNNSHPTTPIMLQEHEQQYEGANANPYGGEKRNSMAAMREMIFRMAAMQPIHIDPESVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERASSANNNIRPLNAAGQIGFPVASTPYFPLPSKPYQAPNMDNMHDTYH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00367 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Gma06g00367 258 CDD bHLH_AtIND_like 154 210 - -
Gma06g00367 258 Pfam Helix-loop-helix DNA-binding domain 162 202 IPR011598 GO:0046983
Gma06g00367 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 212 IPR036638 GO:0046983
Gma06g00367 258 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 3 255 - -
Gma06g00367 258 SMART finulus 159 208 IPR011598 GO:0046983
Gma06g00367 258 Gene3D - 152 222 IPR036638 GO:0046983
Gma06g00367 258 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 3 255 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00367 Gma-Chr6 3121367 3122143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00367 113 229 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 77.119 8.88e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma06g00367 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00367 - - gmx:100788158 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00367 06 3121367 3122143 Gma06g00367 06 3121367 3122143 ECH
Gma04g00373 04 3182026 3182820 Gma06g00367 06 3121367 3122143 GST