Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00356 ATGCATGTGGTTGTGGTGAAAGAGGCAAATTTGAGCACGGGAATAGGAGCAGATAATCAGAAAACAATGGCCGTAGCAATAGGAAGAAGCTTCTCCATTCAGCCCGGCTCTTTATTCAACAACAAGAGCTTGGATAGAGGTTCACCAGCTGGAAGATTATCGTGGCTTGGGGATGGTGCTGCTGCCACTCCACGTTATAGGCAAACTTGTGTTGGGGCGCAACAGCGACCTACATGGCTCCCAGGACTTGATCCCCCACCTCATCTTGATGGAACTCTTGCTGGAGATTTTGGGTTCGACCCACTTGGACTTGCAGAGGATCCGGCAAGCTTAAGGTGGTATGTGCAGGCAGAGCTGGTTCATTGTCGCTTTGCAATGCTTGGGGTCTTCGGAATTCTAGTGACAGATCTACTTCGCGTCACAGGAATTAGTAAGATACCGGTTTGGTTTGAAGCTGGTGCGGTAAAATACGACTTTGCCAATACAAAGACACTCTTCCTTGTTCAACTAGTTCTGATGGGGTTTGTGGAAACTAAAAGGTATATGGATTTTGTTAGTCCTGGATCTCAAGCTAAAGAGGGGTCCTTCTTTGGATTGGAAGCTTCACTGAAAGGCTTAGAGCCAGGGTACCCTGGGGGTCCTCTGCTAAATCCTCTTGGCCTAGCTAAAGATATTAATAACGCTCATGACTGGAAGCTTAAAGAGATTAAGAATGGGCGACTCGCAATGGTGGCAATGCTTGGCATCTTTGTACAAGCTTCAGTGACTCATGTTGGACCAATTGATAATCTTGTGGAGCATCTTTCCAATCCATGGCATAAAACAATTATTCAGACCCTTGCCAATTCTAGCTCTTAG 858 0.4639 MHVVVVKEANLSTGIGADNQKTMAVAIGRSFSIQPGSLFNNKSLDRGSPAGRLSWLGDGAAATPRYRQTCVGAQQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAELVHCRFAMLGVFGILVTDLLRVTGISKIPVWFEAGAVKYDFANTKTLFLVQLVLMGFVETKRYMDFVSPGSQAKEGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLANSSS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00356 285 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 281 IPR001344 GO:0009765|GO:0016020
Gma06g00356 285 Pfam Chlorophyll A-B binding protein 85 253 IPR022796 -
Gma06g00356 285 Gene3D Chlorophyll a/b binding protein domain 78 285 - -
Gma06g00356 285 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 23 281 - -
Gma06g00356 285 SUPERFAMILY Chlorophyll a-b binding protein 72 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00356 Gma-Chr6 3054737 3056559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00356 60 280 Chloroplast and Mitochondria Gene Families AT3G61470 46.188 4.47e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00356 K08911 - gmx:100804934 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00356 06 3054737 3056559 Gma06g00356 06 3054737 3056559 ECH
Gma04g00365 04 3120825 3122776 Gma06g00356 06 3054737 3056559 GST