Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00344 ATGTGGGGATTTGGTGGTAGATATTATTGGGAAAGAAAAGTGGCTTGTGAAAAAGTCGATGGGATAGTTGTGGTGTTCGCGTGGATGTCAAGCGAGGAGAAGCACTTGATGAAATACGTGGACCTCTATTCCTCTATTGGATGGAATTCACTCGTTTGCCATTCTCAATTTCTCAATATGTTCTTCCCAGAGAAAGCCACAATTCTTGCTGTTGATATTCTTAATGAACTTGTTGAGGTGCTGAAAATCAGGCCTTGCCCCATTGTTTTTGCATCCTTTTCAGGCGGTGCAAAAGCTTGTATGCAGAAGGTTCTTCAGATAATTAGTGGCAACTCTGAAGCTCATAATATGGATGACTACCAGATAGTTAGAGACTGTATTTCTGGCTATATTTATGATTCAAGCCCAGTTGATTTTACCAGTGATTTGGGTGTTCGATTTCTTCTACAACCAAGTGTTTTAAAAGTGTCCCACCCTCCAAGATTTGCTTCATGGATTGCAAATGGCATAGCTTCTGGTCTTGATTCTCTTTTCCTCAGTAGATTTGAATCACAGCGTGCAGAATATTGGTGGACACTTTACTCCACCATTAATATGCAGGTCCCGTATCTCATTTTATGTTCAGAAAATGATAATCTTGCTCCTTTTCAAGTTATTTCAAATTTTTTCCAAAGACTAAAAGACCTTGGTGGAGATGTCAAATTGTTAAAATGGAGTGCTTCTCCTCATGTAGGTCATTTTCGGCATCATCCAATTGATTACAAGGCTGCTATCACTGAGATCCTTGGCAAGGCAGTTGCAATTTATCATTCCAAAAATAGTCGAATTGAAGACGAGAAACAGGGTATAGAAGGAACAAAAGATGAGATCACAGATCCGTTCTCTGAATTGAGGAAAGCAGCAATGTTCTCAACTAGTTTTCAGGGTTTTGCTCTTGCTCCAAGTGATAATTTGTCTTCTAGTTCAACGGAGTATTATGTGGGTAAAGGTGTTGGCACCATAGCAGATGAACGCAAAGGAGGGTTTATTCATCTCCCGAGCCGTCCTAGCATCAATGCAAATGGGGTTCTTGGCCAAATATTGTTTGATGTTTGTGTGCCCAAGAATGTTGAGGATTGGTGTATCAGGTCAAATTCCAAGAATGCACTAGTAGCAGACCACCCACTAGCGGCGAATTGTGTAGCAAGGAAAGAAGCAGAGGCTGAGGAAACAATGAAGATATTGGTGACCGGCGCATCCGGTTTCCTCGGTGGAAAACTCTGCGACGCCCTCGTCCGGCAAGGTTACTCTGTCAGGGTTCTCGTAAGATCCACCAGCGATATCTCCGCCCTTTCTCCGCACATCGAAATCTTCTACGGCGACATCACCGACTACGCCTCTCTCCTCGCCGCCTGCTTCTCCTGCACTCTCGTCTTCCACCTTGCCGCCCTCGTCGAACCCTGGCTTCCTGATCCTTCCAAATTCTTCTCCGTCAACGTTGGAGGATTGAAAAACGTGTTGGCGGCGGTGAAGGAGACTCGCACAGTGGAAAAACTCCTGTATACGTCGTCGTTTTTCGCTCTCGGACCAACTGATGGAATCGTCGCCGACGAGAATCAAGTCCATCACGAGAAATATTTCTGTACGGAATATGAGAAATCGAAGGTGGCCGCGGATAAGATTGCGGTGCAAGCTGCGTCGGAGGGGGTGCCAATAGTACTACTGTATCCCGGAGTAATCTATGGGCCTGGCAAGGTCACTGCAGGAAACGTTCTTGCACGAATGATAGTAGAGCGGTTTAGTGGTCGATTGCCTGGTTACGTGGGGTATGGAAACGATAGATTTTCGTTCAGCCATGTGGAGGATGTGGTGGAAGGGCACATTGCAGCAATGAAAAAAGGAGAAGCTGGGAATAGGTATCTACTAACGGGGGAAAATGCGTCCTTCAAGCATGTTTTTGATATGGCTGCTGCGATTACTCATACTAAAAAACCACTGTTCAGCATCCCATTGTGGCTAATTCAACTCTATGGCTGCCTCTCTGTTTTCTTCTCTAGAATCACCGGAATGCTACCTCTCATCAGTCCACCGACAGTACATGTTTTAAGACATCGGTGGGAATATTCCTGCGACAAAGCTAAAAGGGAGCTTGATTATAGGCCCAGAAGCCTGAAAGATGGACTTGCAGAGGGCCTTCCAGTTCATTTCTGCAAGAGCAATCTTCCAAAGGAGGACGAAGTGATGACTTTGATTGATGAGGATGGGAATGAGTATCCAACAATATATTTGGCACGGAAAACAGGACTTAGAGGTGGATGGAAAGGTTTTGCGGTTGCTCATGACCTAGCTGACAGAGATGCTGTAATTTTCAATTAA 2355 0.448 MWGFGGRYYWERKVACEKVDGIVVVFAWMSSEEKHLMKYVDLYSSIGWNSLVCHSQFLNMFFPEKATILAVDILNELVEVLKIRPCPIVFASFSGGAKACMQKVLQIISGNSEAHNMDDYQIVRDCISGYIYDSSPVDFTSDLGVRFLLQPSVLKVSHPPRFASWIANGIASGLDSLFLSRFESQRAEYWWTLYSTINMQVPYLILCSENDNLAPFQVISNFFQRLKDLGGDVKLLKWSASPHVGHFRHHPIDYKAAITEILGKAVAIYHSKNSRIEDEKQGIEGTKDEITDPFSELRKAAMFSTSFQGFALAPSDNLSSSSTEYYVGKGVGTIADERKGGFIHLPSRPSINANGVLGQILFDVCVPKNVEDWCIRSNSKNALVADHPLAANCVARKEAEAEETMKILVTGASGFLGGKLCDALVRQGYSVRVLVRSTSDISALSPHIEIFYGDITDYASLLAACFSCTLVFHLAALVEPWLPDPSKFFSVNVGGLKNVLAAVKETRTVEKLLYTSSFFALGPTDGIVADENQVHHEKYFCTEYEKSKVAADKIAVQAASEGVPIVLLYPGVIYGPGKVTAGNVLARMIVERFSGRLPGYVGYGNDRFSFSHVEDVVEGHIAAMKKGEAGNRYLLTGENASFKHVFDMAAAITHTKKPLFSIPLWLIQLYGCLSVFFSRITGMLPLISPPTVHVLRHRWEYSCDKAKRELDYRPRSLKDGLAEGLPVHFCKSNLPKEDEVMTLIDEDGNEYPTIYLARKTGLRGGWKGFAVAHDLADRDAVIFN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00344 784 Gene3D - 394 728 - -
Gma06g00344 784 CDD AR_FR_like_1_SDR_e 407 723 - -
Gma06g00344 784 SUPERFAMILY DNA-binding pseudobarrel domain 724 783 IPR015300 -
Gma06g00344 784 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 403 723 IPR036291 -
Gma06g00344 784 ProSiteProfiles B3 DNA-binding domain profile. 725 784 IPR003340 GO:0003677
Gma06g00344 784 SUPERFAMILY alpha/beta-Hydrolases 71 264 IPR029058 -
Gma06g00344 784 Pfam Eukaryotic protein of unknown function (DUF829) 22 109 IPR008547 -
Gma06g00344 784 Pfam Eukaryotic protein of unknown function (DUF829) 127 373 IPR008547 -
Gma06g00344 784 PANTHER DUF829 DOMAIN PROTEIN 1 323 - -
Gma06g00344 784 Gene3D alpha/beta hydrolase 148 271 IPR029058 -
Gma06g00344 784 PANTHER UNCHARACTERIZED 1 323 IPR008547 -
Gma06g00344 784 CDD B3_DNA 725 783 IPR003340 GO:0003677
Gma06g00344 784 Pfam NAD dependent epimerase/dehydratase family 407 633 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00344 Gma-Chr6 2983078 2992279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00344 724 784 B3 DNA Binding Superfamily AT5G42700 67.213 1.27e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00344 - - cic:CICLE_v10003480mg 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00344 06 2983078 2992279 Gma06g00344 06 2983078 2992279 ECH