Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00341 ATGCAGAAACTAGAGGAAGTTGGAAGCTCTGTCAAGGCTCGGATAAAGAAGATAATGCAAGCTGATGAGGATGTTGGAAAGATAGCACTCGCTGTGCCTGTTTTAGTTTCTAAAGCTCTAGAACTATTTTTGCAAGATCTTTGTGACCGCACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATTCATTGCATTTTGGGGAGGAAAGAGATATGCCCGTCGCTAGCAAAACCAGAAATATGCTTGAAGGTTTGGTAAAAGAAGGATCATTGAAATGGTTGCTTGGCAAGAAGAGTTACTTTGGTGAAGAATTTGAAGAGATGGAAAATTCTCCTTCTGCTGGGAAGAACTTTATACGAGAGCTCTCTCCTGTTGCAAACCTAGTTGTTCGTAGATGCTCAAAAATCCTTAGGACCTCTTCAAGTGATCTTCTGGAGAGCTTCAATCAAGAGGCTTCTGATTCTATGAAGCATCCATCACGATATGCGAGGAACTTTTTGGAATATTGTTGTTTCAAAACCCGGTTAGGACTTATCTTCGAAGACCATGGAAGCAATATTCAAGAACAATTTTAA 582 0.3986 MQKLEEVGSSVKARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHFGEERDMPVASKTRNMLEGLVKEGSLKWLLGKKSYFGEEFEEMENSPSAGKNFIRELSPVANLVVRRCSKILRTSSSDLLESFNQEASDSMKHPSRYARNFLEYCCFKTRLGLIFEDHGSNIQEQF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00341 193 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 74 176 - -
Gma06g00341 193 SUPERFAMILY Histone-fold 13 65 IPR009072 GO:0046982
Gma06g00341 193 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 12 67 IPR003958 -
Gma06g00341 193 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639) 74 176 - -
Gma06g00341 193 Gene3D Histone, subunit A 11 70 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00341 Gma-Chr6 2965570 2969101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00341 13 68 CCAAT-HAP5 Transcription Factor Family AT3G12480 91.071 9.55e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gma06g00341 CBFD_NFYB_HMF 4.9e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00341 - - gmx:102660227 243.817