Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00324 ATGGCCACGAGTTACTTTCTATTGCTCTCATTATTCCTCCTTTCATCATCTGTCTCTCATGCACTTTCCAATGTTGAAGCTTCTTTCATTGTTCGTCGCCAATTATTGCACTTACACGAGAATGATGAATTATCTGACAACTATGCAGACAATTATGAAACAAATCTAACTTTCCCCAACCCCAGACTAAAAAGTGCATACATTGCTCTTGAGGCATTAAAAAAAGCAATCTACTCAGACCCATCAAATTTCACAGCAAATTGGGAGGGCCCAAATGTTTGCTCTTATAACGGAGTTTTTTGTGAAAAGGCCTTAGATGATCCAAAGATCGATGTTGTAGCTGGGATTGACCTTAACCATGCAGACATCGCAGGTTACATTCCCCCCGAGATCGGTTTGTTAACCGACCTTGCGCTTTTCCATATAAACTCAAACAGGTTTTGTGGGGTTCTCCCAAAAAGTTTTTCCAAGCTTAAGCTTCTTTATGAGCTAGACATCAGCAACAACCGCTTTGTTGGGCGATTCCCTGAGCCTGTGCTTTTAATTCCAGACATTAAATTCCTTGACCTCAGGTTCAATGAGTTTGAAGGGGAATTACCTTCTGAGCTTTTCAACAAAAGCCTTGACGCTATCTTTTTGAACAATAACCGTTTCACGTCCACAATTCCTCAGAACATGGGATCTTCTCCAGCTTCAGTTATGGTTTTTGCCTATAACAATCTCACAGGTTGTCTGCCTTCAAGTATTGGCAACATGACAAAGACATTGAACGAGTTTGTTTTAATCAACAACAACCTCACTGGTTGCTTGCCTGCAGAGATTGGAAAGCTCGAACAAGTTTATGTGTTTGACATAAGCCAAAACAACTTTGTTGGCATGTTACCAAGGACATTTGATGGGCTTAAGAACGCGGAGCACTTATCCATTGGACACAACAAGCTCACGGGTTTTGTCCCACGTAATGTTTGCAGCTTGCCTAATTTGGTCAACTTCACATTCTCTTATAACTATTTCAACGGTGAGGAAGAAGGTTGTGTGCCTCCTAAGAAAGATGTTGTGTTGGATGATGAGAACAATTGCATACCAAATAGGCCAAAACAAAAGGTTGCAGACGTTTGCAATGTGGTGATAAGCAAGCATGTGGATTGTAAATGTGGAAGTGGAAACCCATCTCATTCTTCCAATCCTCCAACAACACCATCTAGCCCATCACCAAAATCTCCATCTGAATCACAACCTTCCAGTCCTCCTAAAGTTGAGacaccaaagccacaacctcaacctaccccttcaacaccaaagccacaacccagcccaaccccttctaccccaaagacacaagaacccagccccacctcttctacccccaatcctccaacccctaagccacaagaacccaaacctaccccttctccctcaaatcctccaacaccaaagccacaaccacccaaagcaaccccttctccctcaaatcctccaacaccacagccacaaccacccaaagcaaccccttctccctcaaatcctccaacaccaaagccacaaccacccaaagcaactccttctccctctaatccttcaacaccacaagcACCCAAAGTAGCACCACCACCAGAGGAAGATCCCCATAGGGAAGCACCTCGACAACGACAAAGACCTTCAGAAtctcctccaccacttgttcagtctcctcctccaccagttcactccccaccaccacatgttccttctccaccacccccaatagtacattcccctcccccaccaattcactctcctccaccacctgtccattctcctccaccacctgtccactctccaccacctcctgtccattctcctccacctcccgtccactctccaccacctcccgtccattctcctccacctcctgttcactctccaccacctcccgtccattctcctccacctcctgttcactctcctccaccactggtccattctcctccaccacctgtccactctccaccacctcctgtccattctcctccacctcctgttcactctcctccaccacctgtccactctccaccacctcccgtccattctcctccacctcctgttcactctccaccacctcccgtccattctcctccacctcctgttcactctccaccacctcccgtccattctcctccaccacctcccgtccattctcctcctccacctgttcactctccaccacctcccgtccattctccacccccaccagttcattctccgccaccacccgtgtactccccaccaccaccagtgcattctccaccaccaccaatacactctccaccaccTCCTACACCCTCTATTTCACCTCCTCCTTTTGAAGATGTCGTTCTTCCCCCTCACTTCGGCTCTTCTTATGCTTCACCCCCTCCACCTATCATTCCCGGCTACTAA 2418 0.2531 MATSYFLLLSLFLLSSSVSHALSNVEASFIVRRQLLHLHENDELSDNYADNYETNLTFPNPRLKSAYIALEALKKAIYSDPSNFTANWEGPNVCSYNGVFCEKALDDPKIDVVAGIDLNHADIAGYIPPEIGLLTDLALFHINSNRFCGVLPKSFSKLKLLYELDISNNRFVGRFPEPVLLIPDIKFLDLRFNEFEGELPSELFNKSLDAIFLNNNRFTSTIPQNMGSSPASVMVFAYNNLTGCLPSSIGNMTKTLNEFVLINNNLTGCLPAEIGKLEQVYVFDISQNNFVGMLPRTFDGLKNAEHLSIGHNKLTGFVPRNVCSLPNLVNFTFSYNYFNGEEEGCVPPKKDVVLDDENNCIPNRPKQKVADVCNVVISKHVDCKCGSGNPSHSSNPPTTPSSPSPKSPSESQPSSPPKVETPKPQPQPTPSTPKPQPSPTPSTPKTQEPSPTSSTPNPPTPKPQEPKPTPSPSNPPTPKPQPPKATPSPSNPPTPQPQPPKATPSPSNPPTPKPQPPKATPSPSNPSTPQAPKVAPPPEEDPHREAPRQRQRPSESPPPLVQSPPPPVHSPPPHVPSPPPPIVHSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPLVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPIHSPPPPTPSISPPPFEDVVLPPHFGSSYASPPPPIIPGY 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00324 805 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 620 687 - -
Gma06g00324 805 MobiDBLite consensus disorder prediction 552 785 - -
Gma06g00324 805 MobiDBLite consensus disorder prediction 396 536 - -
Gma06g00324 805 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 683 749 - -
Gma06g00324 805 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 5 624 - -
Gma06g00324 805 Gene3D Ribonuclease Inhibitor 66 360 IPR032675 -
Gma06g00324 805 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 620 687 - -
Gma06g00324 805 Pfam Leucine rich repeat 280 336 IPR001611 GO:0005515
Gma06g00324 805 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 698 802 - -
Gma06g00324 805 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 5 624 - -
Gma06g00324 805 MobiDBLite consensus disorder prediction 537 551 - -
Gma06g00324 805 PRINTS Proline rich extensin signature 392 413 - -
Gma06g00324 805 PRINTS Proline rich extensin signature 434 451 - -
Gma06g00324 805 PRINTS Proline rich extensin signature 454 479 - -
Gma06g00324 805 PRINTS Proline rich extensin signature 413 429 - -
Gma06g00324 805 SUPERFAMILY L domain-like 73 361 - -
Gma06g00324 805 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 683 749 - -
Gma06g00324 805 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 663 728 - -
Gma06g00324 805 Pfam Leucine rich repeat N-terminal domain 68 101 IPR013210 -
Gma06g00324 805 MobiDBLite consensus disorder prediction 386 805 - -
Gma06g00324 805 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 698 802 - -
Gma06g00324 805 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 663 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00324 Gma-Chr6 2809288 2811705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00324 21 492 Trihelix Transcription Factor Family AT4G33970 55.187 3.21e-175 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00324 - - gmx:121175033 768.459