Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00259 ATGTATCCCAACCAAGCCTTTTCTTCAGGTTCTTATGCGGAGATGATGTCTGGGACTTCTCTGTTACCTCATGACTACAGTGAAACTGTAGGTGGAGGACAAAACGAGGTTAAGTTTATCACAGCAATGGGTGAGACAGTGACCATGCACTCTATTAATGGTCATTCCAATGCTGCAAATGGTGATCCATCATGCAACTCTTTTGCTGGGGATTCCCACGTTGTTTCAAGGACACAAATGGGAATGGCAGATAGTGAGCAAAACGTAAATTGTCAGGGCCTATCTCTCAGTCTTGGGACACTCATGCCTTCTAATGCATCCGTCTCTCCATTTCAATACCAATATCACGACACTGGTCTCTTACCACTAATGAATGATTATCCAAATCCAAAGGGAGCCATGTCTCTCAAAAATGATGAGGGCAATAACCTACATAGGGAGTTTAGAAGTGCTGAATGCATGGCATCTGTGTCTTCTGGAGGCTTTCTTGACATGGTAAAAAAGGAGTGTTTTTACAACCCCCATGACCCCTCAATGTGTCTTAAAGAAGTCCCCTCTGATCTACCAGGTTACTCAAACAGTATTTTGAACTCTCAATACCTGAAGGCGGCACAAGATTTGCTTGATGAAATAGTTAGTGTCCGAAAGGCTTTGAAGCAATCTGGAATGGAAAAACAAGAGAACACTGGATTAGATGGCTCTAAAGATTCTGATGGAAAATCTACCAGTCAATCTATGCAAATGTCTTCAGGCCCTAATGGTTCCACTGCTAATGCTTCTAGTGAACTATCATCCGCAGAGCGGCAGAACTTGTTGGACAAGAAAACAAAGCTTTTGTCCATGTTGGATGAGGTAGATAAAAGATACAGACAGTACTGCCATCAGATGCAGATTGTGGTGTCATCTTTTGACATGGTTGCTGGCTGTGGAGCAGCAGAACCATATACCACACTTGCCTTAAGAACAATTTCTCGCCACTTTCGGTGTTTGCGTGATGCCATCAGTGGCCAAATTCAGGTGACCCAAAGAAGCCTTGGGGAGCAAGAAGGAATACCCCGTCTCCGCTATGTGGATCAGCAACTTAGACAACAAAAGGCACTTCAGCAACTTGGTGTAATGAGACAAGCTTGGAGGCCTCAGAGGGGTCTTCCTGAAAGCTCTGTTTCAATACTCCGTGCTTGGCTCTTTGAACATTTTCTTCATCCTTACCCCAAGGATTCTGAGAAAATTATGCTGGCTAGGCAAACAGGCTTGACCAGAAACCAGGTGGCCAATTGGTTCATCAATGCAAGGGTGCGTCTCTGGAAGCCAATGGTTGAGGAAATGTACAAAGAGGAGTTTGGAGACTCCGAGATGAACTGCAACCTTTCATCTGAGAACAACACGGTCAAATGTAAAAAAGATGATCTTGTTCAAGAGTCTGATAACATTAACAACAATAATAAATGGGAAGAGACACAGGACAATTTAGTAACTGTTGACAGTGTCCAAGTCCAACCTCAAGCAGAACTGGATAGAGGGGTCAATGTAGAAAATGTGGTGATGGATTCTGGAACTGGGAAATTGCAGGGTGATCAAAACCAACAAAGGCTTGGCATGAACAACAACAACAACTTTTATTCTATCTCAACCAACCAGAATGATGGAGGCCTAATGGGTTGTTCTACTCATGCCACATATGATTTATCAGAGTTGGGTAACTTTACTGTGGGTAGCCACGTTTCCCTTGCATTGGAGTTGAGGAACTGTGAAAGTGATGGGTTTGCCATGTCTGATGATGCCATACGCAAACGACGTAATCAAGCATTGGCCTCTTCCCCGGAGACTGATTTGCTAGATTATCATTTCACGGATTCAGGAAAGCAACAACACAGGTTTGGCAATCCCCATTTGCTGCATGAGTTTGTCGTATGA 1914 0.4373 MYPNQAFSSGSYAEMMSGTSLLPHDYSETVGGGQNEVKFITAMGETVTMHSINGHSNAANGDPSCNSFAGDSHVVSRTQMGMADSEQNVNCQGLSLSLGTLMPSNASVSPFQYQYHDTGLLPLMNDYPNPKGAMSLKNDEGNNLHREFRSAECMASVSSGGFLDMVKKECFYNPHDPSMCLKEVPSDLPGYSNSILNSQYLKAAQDLLDEIVSVRKALKQSGMEKQENTGLDGSKDSDGKSTSQSMQMSSGPNGSTANASSELSSAERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTTLALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMNCNLSSENNTVKCKKDDLVQESDNINNNNKWEETQDNLVTVDSVQVQPQAELDRGVNVENVVMDSGTGKLQGDQNQQRLGMNNNNNFYSISTNQNDGGLMGCSTHATYDLSELGNFTVGSHVSLALELRNCESDGFAMSDDAIRKRRNQALASSPETDLLDYHFTDSGKQQHRFGNPHLLHEFVV 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00259 637 MobiDBLite consensus disorder prediction 235 267 - -
Gma06g00259 637 SUPERFAMILY Homeodomain-like 378 444 IPR009057 -
Gma06g00259 637 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 29 597 - -
Gma06g00259 637 Pfam Homeobox KN domain 394 433 IPR008422 GO:0003677|GO:0006355
Gma06g00259 637 SMART prehox3 189 336 IPR006563 -
Gma06g00259 637 CDD homeodomain 377 438 IPR001356 GO:0003677
Gma06g00259 637 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 29 597 - -
Gma06g00259 637 ProSiteProfiles 'Homeobox' domain profile. 374 437 IPR001356 GO:0003677
Gma06g00259 637 Gene3D - 374 451 - -
Gma06g00259 637 MobiDBLite consensus disorder prediction 221 267 - -
Gma06g00259 637 Pfam Associated with HOX 195 335 IPR006563 -
Gma06g00259 637 SMART HOX_1 377 441 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00259 Gma-Chr6 2311610 2317021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00259 188 478 Homeobox Transcription Factor Family AT2G16400 60.596 3.40e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma06g00259 POX 7.9e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00259 - - gmx:100807409 1258.82