Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00244 ATGGTGAATGAAGGTCGTTTTCTTCCCACGATGGATCTGCTACGGTCGGAGCCTATGCAACTGGTTCAATTGATCATTCCAATCGAATCGGCTCATCGATCCATCTCTTACCTTGGCGATCTCGGCCTCATTCAATTCAAAGATCTCAATGCAGATAAAAGTCCATTCCAGCGAACTTATGCTTCTCAGATTAAAAGATGTGGGGAAATGGCACGTAGGCTACGGTTGTTTAAGGAACAAATGACGAAAGCAGGTGTATCGCCCTCAACGTGGTCAACAAGAGACAATCATTTTGATCTGGAACATTTGGAGGTTGTTAAACTTGAAGAACTTGAAGCTGAGCTCCTCGAGATTAATGCAAATAATGAAAAGTTACAACACACTTACAATGAGCTATTAGAGTATAAGCTTGTTCTGGAGAAGGTTGGAGAGTTTTTCTCTTCAGCAAAAAATAAGGCTGTAGCTCAGCAGAAAGAGCTTGAATTTCAGACAACTGTTGAAGGGTCTATTGACAGTCCATTATTATTGGAACAAGAGGAGACGACAACAAAGCAAATTAAGCTGAGGTTTATTAGTGGACTTGTTCATAGGGAAAAATCAATTCCTTTCGAAAGAATTATATTTCGTGCTACTAGGGGAAATGTGTTTCTCAAACAGGCTGTGATTCAACATCCTGTTCTTGATCCTTTGTCAGGAGAGAAGGTTCATAAAAATGTATTTGTTGTCTTTTATTCTGGAGAAAGAGTTAAAAGCAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTCTCAGATGACTTGAGTAAACAATTTCAGACGATAAGGGAGGTTTCAGGAAGACTTTCAGAATTGAAGACTACCATTGATGCAGGGTTGATTCACCGGAGCACCCTATTGCAGACAATTGGATATCACTATGAGCAGTGGAGCCTTCAGTTGAAGAAGGAAAAATCCATTTATCACACTCTAAATATGCTTAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCAACAAGCCAGATTCACAAAGTATTGGAGCGGGCAACTATGGACTGCAGTTCTCAAGTTGGGGCGATATTTCAAGTTTTAGAGACAAAGGAATCACCACCTACCTATTTTAGCACAAACAAATTCACTTCTTCTTTTCAAGAAATTGTAGATGCCTATGGAATCGCCAAGTACCAGGAAGCAAATCCCGGTGTATACACAATTGTCACATTTCCATTCCTTTTTGCTGTGATGTTTGGTGACTGGGGGCATGGCATATGCTTATTACTGGCGGCTTTGTATTTAATAATCAGAGAGAAAAAATTTGCAAGTCAGAAACTTGGAGACATAATGGAAATGGCATTTGGCGGACGCTATATCATTATGCTGATGGCCCTCTTCTCAATCTATACCGGGTTGATATATAACGAGTTTTTCTCTGTTCCATTTGAACTATTTGGACCATCTGCTTATGGATGTCGTGATTCTTCATGCAGGGATGCTTCTACAACAGGTTTTATAAAAGTGCGTAGCACTTATCCATTTGGTGTGGATCCTAAATGGCATGGAACTCGGAGTGAACTTCCATTTCTTAATTCTTTGAAGATGAAGATGTCAATTCTGCTGGGGGTATCCCAGATGAATCTTGGAATCATAATGAGTTACTTTAATGCAAAATACTTCGAAAACAACATAAATATCTGGTACCAGTTCGTTCCCCAGATAATATTCTTAAACAGCTTGTTTGGCTACCTTTCACTCCTCATAATTATAAAATGGAGCACTGGGTCACAGGCTGACCTGTATCATGTGATGATATACATGTTCCTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTTTTTGTTGGTCAAAAGCTCCTTCAACTCGTGTTACTACTGTTGGCACTTGTTGCTGTACCATGGATGCTAGTACCAAAGCCCTTTCTCCTGAAGAAGCAACATCAAGAAAGGCATCAAGGCCAATCTTACGATTTGCTCTACGGCACCGATGACCCTCTTGAATCAGAATCACAAAGTATTCCCCATGACGAATTTGACTTCAGCGAGGTTTTTGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGAGCTGTTTCTAACACGGCTTCGTATCTACGTTTATGGGCCCTCAGCTTAGCTCATTCAGAGTTGTCGAGTGTTTTCTATGACAAAGTTCTCCTTCTGGCCTGGGGGTATAATAGCACTATTGTTCTCATTGTTGGCATTTTTGTTTTTATCTGTGCAACTGTTGGTGTGTTACTGTTAATGGAAAGTCTAAGTGCTTTCTTACATGCTTTGAGACTTCACTGGGTAGAGTACCAGAACAAATTTTATGAGGGAGATGGTTACAAGTTCTTCCCGTTTTCGTTTACATTACTCACGGATGAGGATGAACTGTAA 2451 0.3998 MVNEGRFLPTMDLLRSEPMQLVQLIIPIESAHRSISYLGDLGLIQFKDLNADKSPFQRTYASQIKRCGEMARRLRLFKEQMTKAGVSPSTWSTRDNHFDLEHLEVVKLEELEAELLEINANNEKLQHTYNELLEYKLVLEKVGEFFSSAKNKAVAQQKELEFQTTVEGSIDSPLLLEQEETTTKQIKLRFISGLVHREKSIPFERIIFRATRGNVFLKQAVIQHPVLDPLSGEKVHKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLSKQFQTIREVSGRLSELKTTIDAGLIHRSTLLQTIGYHYEQWSLQLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSQIHKVLERATMDCSSQVGAIFQVLETKESPPTYFSTNKFTSSFQEIVDAYGIAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLAALYLIIREKKFASQKLGDIMEMAFGGRYIIMLMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDSSCRDASTTGFIKVRSTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIIMSYFNAKYFENNINIWYQFVPQIIFLNSLFGYLSLLIIIKWSTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKLLQLVLLLLALVAVPWMLVPKPFLLKKQHQERHQGQSYDLLYGTDDPLESESQSIPHDEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGYNSTIVLIVGIFVFICATVGVLLLMESLSAFLHALRLHWVEYQNKFYEGDGYKFFPFSFTLLTDEDEL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00244 816 PIRSF ATP6V0A1 9 816 IPR026028 GO:0000220|GO:0046961
Gma06g00244 816 PANTHER VACUOLAR PROTON ATPASES 11 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gma06g00244 816 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 11 816 - -
Gma06g00244 816 Pfam V-type ATPase 116kDa subunit family 37 807 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gma06g00244 816 Coils Coil 108 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00244 Gma-Chr6 2183703 2191486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00244 11 815 Primary Pumps ATPases(2) AT4G39080 74.413 0.0 1248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00244 K02154 - gmx:100805813 1537.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00244 06 2183703 2191486 Gma06g00244 06 2183703 2191486 ECH