Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00224 ATGGGGAAATCTACCTCCTGCTTCAAACTAATCACTTGCGGTGGCGATGCGGCGGAGAAGGATGATTACCACCAAGTCTCTGAGATCAAGGAATCTAACGATAAACGTGGTTGGAGTTTCCGAAAGAAATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAGCAGAGGCCCCATCTTCTGCAAATAAGGAAACTTCAGAATGTAGTACTTTTAATTTTCAACCACTTCCTGAACCTAATGTTGTTGAGAAGATTTACACAACAAATTGCTCTGATGAGAAGCCCCAGTTATCTTCCTTTGAAAGCTCACAAGTAGAAGAAACAAATGTCATTGAAACTGAGGAGAAGTTGGATGTGAATCCACCAGAGTCTGATGTCATCATCATCCAGGCTGCTATTAGAGGGTTATTGGCTCAGAGAGAACTACTACAGCTTAAGAAAGTAGTGAAATTGCAAGCTGCTGTTCGTGGGCACTTGGTCCGGAGACATGCTGTAGGAACCCTGCGTTGTATTCAAGCCATCATCAAAATGCAGATCCTTGTGCGAGCTCGTCGTGCTTGGCAGTCACGTCTGGAAAATCATTTAAATCATAAGGATGGCAAAAGGGATTCCTCAGAAGCTTTGGGAAACAAAAATCTCATGACCAAATCAAATGTGAGTTACATTTCCATTGAGAAGCTGCTTAGCAATAGGTTTGCTAGTCAGCTGTTGGAATCAACACCAAAGAACAAACATATCCATGTAAAGTGTGATCCTTCTAAATCCGATTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCAGTATCATCAAAAGATATTGCAGAGTGCAAAGAAACTAGTTCTTTGGCAGAGCAATCAAGGGAAAGCAAAGATAGTTCTCCCCTGTTTCAATTCGAAACAGGTATTCCTTCTGAACCTTTTCCCCAAGCAGCTGACTCAGAGCTCACTGTTGAAGATTCACTTCTGCCATCTGAGGATGAAGAAAAGTTAATTACTTATGATGCTAATGACTTTGAGTTTCAAGCAAGCTACTCCACATCATCTATTGTAAAAGATGACTTGGTACAGGTTCCTCCTGAAGAAAGAATTGCATATGATGCTAAAGTTGCCTCAGACGAAGCTGATTCCTTCCTAAATGAAAAATCAGCATCAGATGCAAGTGCCCCACcagagcttaatttcattcataaggggcctgaaattgccccaccatcagagcatcattctcttcagaaggggactgaaattgccccaccatcagagcatagctctcttcataagggtcctgaaactgccccaccatcagagcctaattATTTTAATCAGAAGCCTGAAATTGATGGTGAGCAGGGCATACGATCCATGAAAAGATTTGCCTCAGACCAATTAGAGGCTGAAGGAAAGAAACCTGTAAATGGTTCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAGCTTAGTTCAATAGCAAATTCTGTTAGGACAAGCAGTTTGTCCTACCAAGATTCAGCTGTTGAATCACAAGGAGACACCTCTTCTGTAGGCAATGATACTGCATATAGATCAAAAGAGTTTGCATTTGAAAATCCTGCTGCTTATCTTTCTAGGTTTGCTGGTTCTGAATGTGGCACTGAACTCTCTATTTCTTCCACTCTTGATTCACCTGACATATCAGAGCCTGGAGCTACGGAAAATGAGCGAGATGCCAAAGATTTAGTGGAAGGGATTGGTATTCTTGAGAACACTGTAAACCGTGATGATGAGGCCAATGGCAATGTTTCACATGTCATCCCAGCTTCTAACCTAGCTAATTCTGTTTTGGATAAGTCAGAGATTGTTGATGACATTAGTGCCAATTTGGGTCACTCGGTGGTAGCTGTGGACTCTGAAGAGCCTGCTATTAAGACCGAGAAAAATGCACCTGACCTGCAGAGAGAGCTGCCAGAGTCTGTTCTGCAAGATTTAAGATCATCTCCAGAAGCTTCACCTAGAAGCCATTTAACTGTCCCTGAATCACAAGGAACACCTTCAAGTGAAGTGTCTGTAAAACCTAAAGATAGTACAATCAGCAAGACTAGATCTGGCAATAAACGTCGGAGCCTATCATTGAGTAACAAATCACCTACAAATCCAAATCATGATTCAGGCTCAAAAGGCAGTAGGGAGCAACTGCCTAAAGATCAGCAGAATGGAAAGAGGCGCAATTCCTTTGGCTTAGTAAAGCCTGATCACATTGATCAAGAACCTAGAGATAATAGTACTAACAACAATTCTCTTCCCCATTTCATGCTAGCTACCGAATCTGCTAGGGCCAAGGTTAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTGCATGAACGAGACATTGAAGTTAAGAAGAGACATTCCTTACCTGGTGCCACTGGTAGGCAAGTTTCTCCCCGCATCCAACGATCAACATCTAAGGCACAGCAGAGTGCCAAAGGAAACAATGTACATCCTCCTCAAGAGAGAAAATGGCTGAGGTGA 2532 0.3969 MGKSTSCFKLITCGGDAAEKDDYHQVSEIKESNDKRGWSFRKKSARHRVLSNTVIAEAPSSANKETSECSTFNFQPLPEPNVVEKIYTTNCSDEKPQLSSFESSQVEETNVIETEEKLDVNPPESDVIIIQAAIRGLLAQRELLQLKKVVKLQAAVRGHLVRRHAVGTLRCIQAIIKMQILVRARRAWQSRLENHLNHKDGKRDSSEALGNKNLMTKSNVSYISIEKLLSNRFASQLLESTPKNKHIHVKCDPSKSDSAWKWLERWMSVSSKDIAECKETSSLAEQSRESKDSSPLFQFETGIPSEPFPQAADSELTVEDSLLPSEDEEKLITYDANDFEFQASYSTSSIVKDDLVQVPPEERIAYDAKVASDEADSFLNEKSASDASAPPELNFIHKGPEIAPPSEHHSLQKGTEIAPPSEHSSLHKGPETAPPSEPNYFNQKPEIDGEQGIRSMKRFASDQLEAEGKKPVNGSRKVSNPAFIAAQSKFEELSSIANSVRTSSLSYQDSAVESQGDTSSVGNDTAYRSKEFAFENPAAYLSRFAGSECGTELSISSTLDSPDISEPGATENERDAKDLVEGIGILENTVNRDDEANGNVSHVIPASNLANSVLDKSEIVDDISANLGHSVVAVDSEEPAIKTEKNAPDLQRELPESVLQDLRSSPEASPRSHLTVPESQGTPSSEVSVKPKDSTISKTRSGNKRRSLSLSNKSPTNPNHDSGSKGSREQLPKDQQNGKRRNSFGLVKPDHIDQEPRDNSTNNNSLPHFMLATESARAKVNANNSPRSSPDVHERDIEVKKRHSLPGATGRQVSPRIQRSTSKAQQSAKGNNVHPPQERKWLR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00224 843 MobiDBLite consensus disorder prediction 635 843 - -
Gma06g00224 843 MobiDBLite consensus disorder prediction 501 524 - -
Gma06g00224 843 Gene3D - 123 172 - -
Gma06g00224 843 PANTHER PROTEIN IQ-DOMAIN 32 1 833 - -
Gma06g00224 843 PANTHER IQ-DOMAIN 5-RELATED 1 833 - -
Gma06g00224 843 SMART iq_5 122 144 IPR000048 GO:0005515
Gma06g00224 843 SMART iq_5 145 166 IPR000048 GO:0005515
Gma06g00224 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 190 IPR027417 -
Gma06g00224 843 MobiDBLite consensus disorder prediction 555 577 - -
Gma06g00224 843 MobiDBLite consensus disorder prediction 376 478 - -
Gma06g00224 843 MobiDBLite consensus disorder prediction 450 472 - -
Gma06g00224 843 MobiDBLite consensus disorder prediction 789 805 - -
Gma06g00224 843 Pfam IQ calmodulin-binding motif 127 143 IPR000048 GO:0005515
Gma06g00224 843 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Gma06g00224 843 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Gma06g00224 843 Pfam Protein of unknown function (DUF4005) 749 825 IPR025064 -
Gma06g00224 843 MobiDBLite consensus disorder prediction 662 725 - -
Gma06g00224 843 MobiDBLite consensus disorder prediction 811 833 - -
Gma06g00224 843 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00224 Gma-Chr6 2003442 2009436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00224 476 843 IQD Protein Family AT1G19870 39.211 4.56e-51 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00224 - - gmx:100799424 1655.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00224 06 2003442 2009436 Gma06g00224 06 2003442 2009436 ECH
Gma04g00245 04 2114413 2120091 Gma06g00224 06 2003442 2009436 GST