Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00223 ATGCGTCGATTGCAAAAATCGAAACGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGGTTAGGCTATTCTTATCAGAGGAATCTCCTTCACAGGTTGGGTTAAATTCTCAAGACCACGTCCAAGCAAAGACATCATTGCTGTTGCATCCAGATGGAGCAGGTTCTGACGACATTCTGCCTCCTGGATTTGAGGGAACTCATGCTAAAAGTCAGTCCGAGATTAAGCTATCCCAAATACCAGTTATTAAATGGATTACTCCTCCAAAGATTGAGGTAAATCCCACATGGCGAGTAGCGGTTGGGGAAGAAAGCACAGAGGTAGAGGATCAACCTCAGAGGGAGATGAGAGTACTTGAAGCTATTTATCCTCGAATATCTTCCATTCCTCAAAACCCTTCTGTTTCAATGGATGTTGAAGAGTCCCATTGCATGGATGATCAAACTGCTTTGATACCAATAACACCAATTGAAGAAGAAGAAGCAGCAGCAAAAGCATTAATGGATTCCTTGAAACCATTTGATGTTTCACAATCTCTTCAATTAGCTCCTGGTATTCTTAAGGATTCAAACTCTGCTACAAGTATGCAGTTAGCTTGTGGTCTTGCATCTGATGTAGTTGCTGCTGCATTTGTTGCTTTAACTAGCCTTGTGAAGAGAAATGAACATGGAAATTTTATTGACCATGAATCAGTTAATCATATTCTCAACAATCCAGAAGTGATCGTGAAGTTGGTTAGAGATTATAGAGCTGCTAATAATTCACAATATGTACATAATGCGGGGTCATCCTTGGCGGCCTTTTCAAATCCATCGATTCCTATTCAAGGAGAAACCACTACACCTTCATCGGTTGTTTTTTCAGGCACTTCTTCCTATGCTCCCCCAATTGGAGGTCTGGTGGAACCTATTACTACCCAATGGCCTCCTAGGCCTGCAATGAGTTCAGCTATTGTTTCTTCTTCCATTGAGGTCCCTCCTGCAAGAAATGTAAACTACTATAAGAGCTTAATTCAACAACATGGAGGAGATAAACAAGAAACACTTCCATACTCCAGTAAACGTCAGATTCCTCAGTCAGCAACAAACTATGAGACAACCTCCTACAATCATAGAGGTAAAGTATCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAACACTTCTAAAGGATGTCGGAAGGGAGCTAACTGTGACTACCATCATGATGCATCATTTTAA 1224 0.4085 MRRLQKSKRVSWASDLDLCQVRLFLSEESPSQVGLNSQDHVQAKTSLLLHPDGAGSDDILPPGFEGTHAKSQSEIKLSQIPVIKWITPPKIEVNPTWRVAVGEESTEVEDQPQREMRVLEAIYPRISSIPQNPSVSMDVEESHCMDDQTALIPITPIEEEEAAAKALMDSLKPFDVSQSLQLAPGILKDSNSATSMQLACGLASDVVAAAFVALTSLVKRNEHGNFIDHESVNHILNNPEVIVKLVRDYRAANNSQYVHNAGSSLAAFSNPSIPIQGETTTPSSVVFSGTSSYAPPIGGLVEPITTQWPPRPAMSSAIVSSSIEVPPARNVNYYKSLIQQHGGDKQETLPYSSKRQIPQSATNYETTSYNHRGKVSKPKIMKPCIFFNTSKGCRKGANCDYHHDASF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00223 407 ProSiteProfiles Zinc finger C3H1-type profile. 378 406 IPR000571 GO:0046872
Gma06g00223 407 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 407 - -
Gma06g00223 407 MobiDBLite consensus disorder prediction 344 370 - -
Gma06g00223 407 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00223 Gma-Chr6 1997572 2002307 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma06g00223 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00223 - - gmx:100798902 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00223 06 1997572 2002307 Gma06g00223 06 1997572 2002307 ECH
Gma04g00244 04 2109857 2113030 Gma06g00223 06 1997572 2002307 GST