Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00221 ATGTCTCTTGGAAAGTGCAACATCGTCAGGCTCCGCCAAATGCTGCGGCGGTGGCGTAGCAAGGCCCGCATGTCGGCCCACCGAAtACCGTCCGATGTTCCAGCGGGACACGTGGCGGTGTGCGTGGGCACCAACTCGAGGAGATTTGTGGTGCGCGCGACGTACCTGAACCACCCCGTGTTCAAGAAGCTACTGGTTGAGGCGGAGGAAGAGTACGGGTTCTCCAACCACGGCCTTCTCGCCATTCCCTGCGACGAAGCGCTATTCGAACAACTACTACGCTTCATTTCACGCTCCGACTGCCACCTCGCCCTTAGAAACAACCTCCACTTCTACCTTCAATCCCTACCACTACTCCACTGA 363 0.5785 MSLGKCNIVRLRQMLRRWRSKARMSAHRIPSDVPAGHVAVCVGTNSRRFVVRATYLNHPVFKKLLVEAEEEYGFSNHGLLAIPCDEALFEQLLRFISRSDCHLALRNNLHFYLQSLPLLH 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00221 120 PANTHER SMALL AUXIN-UP RNA-RELATED 7 102 - -
Gma06g00221 120 Pfam Auxin responsive protein 10 95 IPR003676 GO:0009733
Gma06g00221 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00221 Gma-Chr6 1982419 1983083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00221 3 100 Calmodulin-binding Proteins AT4G34750 57.692 6.55e-38 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00221 K14488 - gmx:100786027 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00221 06 1982419 1983083 Gma06g00221 06 1982419 1983083 ECH
Gma04g00240 04 2089429 2090149 Gma06g00221 06 1982419 1983083 GST
Gma17g02451 17 42519242 42520467 Gma06g00221 06 1982419 1983083 PCT
Gma14g02122 14 52370526 52371465 Gma06g00221 06 1982419 1983083 PCT
Gma06g00221 06 1982419 1983083 Gma17g02451 17 42519242 42520467 PCT
Gma06g00221 06 1982419 1983083 Gma14g02122 14 52370526 52371465 PCT