Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00219 ATGGAAACTCAACACCAACAACCCACCATCAAGTCTAGGTTCAGACGCATCTGTGTCTACTGTGGTAGCAGCCCTGGCAAAAACCCCAGCTACCAGCTCGCTGCTATTCAACTCGGAAAACAACTGGTGGAGAGGAACATTGACTTGGTTTATGGAGGAGGAAGCATAGGGTTGATGGGTCTAATCTCACAAGTTGTGTATGATGGTGGACGCCACGTGTTAGGGGTGATTCCAGAGACACTTAATGCAAGAGAGATAACTGGAGAGAGTGTTGGAGAAGTGAGAGCTGTATCGGGCATGCACCAACGCAAAGCCGAAATGGCCCGACAAGCCGATGCATTTATTGCACTGCCAGGTGGATATGGCACCCTTGAAGAACTACTGGAAATTATCACCTGGGCTCAACTAGGCATCCATGATAAACCGGTGGGGTTGTTGAACGTGGATGGgTACTACAACTCGCTGCTGGCATTCATGGACAAAGCTGTGGACGAAGGTTTCGTAACACCAGCTGCCCGTCACATTATTGTTTCTGCCCACACTGCCCAAGAACTCATGTGCAAACTTGAGGAATATGTCCCCGAGCACTGTGGCGTGGCCCCCAAGCTAAGTTGGGAGATGGAGCAACAGTTAGTTAACACTGCAAAGTCAGATATTTCCCGTTGA 666 0.494 METQHQQPTIKSRFRRICVYCGSSPGKNPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPETLNAREITGESVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAHTAQELMCKLEEYVPEHCGVAPKLSWEMEQQLVNTAKSDISR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00219 221 Pfam Possible lysine decarboxylase 59 188 IPR031100 -
Gma06g00219 221 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 7 217 - -
Gma06g00219 221 PANTHER LOG FAMILY PROTEIN YJL055W 7 217 - -
Gma06g00219 221 TIGRFAM TIGR00730: TIGR00730 family protein 16 192 IPR005269 GO:0009691|GO:0016787
Gma06g00219 221 SUPERFAMILY MCP/YpsA-like 13 192 - -
Gma06g00219 221 Gene3D - 4 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00219 Gma-Chr6 1921677 1924575 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00219 K22522 - gmx:100815440 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00219 06 1921677 1924575 Gma06g00219 06 1921677 1924575 ECH
Gma04g00237 04 2031737 2034696 Gma06g00219 06 1921677 1924575 GST
Gma17g02454 17 42576140 42580815 Gma06g00219 06 1921677 1924575 PCT
Gma14g02125 14 52423849 52429057 Gma06g00219 06 1921677 1924575 PCT
Gma06g00219 06 1921677 1924575 Gma17g02454 17 42576140 42580815 PCT
Gma06g00219 06 1921677 1924575 Gma14g02125 14 52423849 52429057 PCT