Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00197 ATGGCTCTGTTTATCAAGTTCTTTAATTCTTCTTTGACAAGCTTAATGCTCCGTTTCATATTATTGTTAGTTCTATCGTTCAGAACGAAGGCTGTGgtgaaactaccaccaaatataacatttcccgcagtgatagcttttggagattcgatcgttgacccgggcaacaacaacatggttaaaacacttgtcaagtgcgatttccctccttacggtaaagattttgagggagggattccaaccggtcgattttgcaacgggaaaatcccatcagatttgctagctgaagaactgggtattaaggagcttttacctgcttatttggatccaaatctcaaaccaagtgaccttgttacgggagtctgctttgcttctggtgcttccggatacgatcctttaacgccaaaaatagcgtcggtgatatcaatgtcggaacaactagacatgttcaaagaatacatagggaagcttaaacacattgttggagaggacagaacaaatttcatcctagccaacagttttttccttgtggtagctggaagtgacgacattgccaacacctattttatcgctcgcgttcgacaattacaatatgatattccagcttatactgaccttatgCTCCACTCTGCTTCTAATTTCGTTAAGgaattatatggacttggagcacgcagaatcggagtactgagtgcaccaccgattggatgcgttccatcacagagaactctagctggaggtttacaaagagagtgcgcagaagaatacaattacgcagccaagttgtttaactccaaattatcaagggaactggattctcttaagcataacttgcccaatagtaggatcgtttacattgacgtttacaacccTCTAATGGATATCATTGTGAACTACCAACGTTATGggtataaagttgtggatagaggatgctgtggcacagggaaattggagggtgggataccaacaggaagattcagcaatggcaaggtccctgctgacttcatagcggaagagttgggaatcagcgaatatataacaccatacaagagtcctagtttgcagcctggtgatctcctcaagggagtcaactttgcttcgggtggctccggatatgattctttgaccgcacaaatagtgTCTGTCACACCATTATCTGAGCAACTAGAGCAATTCAAAGAATACATAGGAAAGCTCAAGGGAAATTTTGGAGAAGCAAAAACCAACTTCATCTTGTCCAAAAGTTTAGTACTTGTGGTGTCAAGCAGCAACGACATTGCCAATACTTATTTTGCATCAGGAGTTAGGAAAGTGACTTATGATGTTTCGGGTTATACTGATATGTTGGTGCAAGAAGCCTCTTCTTTCGTTAAGGAATTATATGGATTGGGGGCAAGGAGAATAGGAGTGTTTGGTGCACCTCCACTAGGATGTTTGCCATTCGTACGAACGTTGTTTGGAGGTCTAGAGAGAGTGTGCACCGAAGAAATAAACATGGCATCAAAATTGTTTAACTCTAAACTATCTTCAGAGCTGCACAACCTAAACCAAAGCTTGCCTCAAGCGAAGGTGGTGTATATCCGTATTTACGACTCTTTGCTCAATATCATCCAAAACCCAATCAATTATGgatttgatgttgctgacagaggatgctgcggtacagggacggtagaggcggcttttctgtgtaatccgttagatccaacaacctgcgtagatgattccaaatatgtgttttgggacagctaccatcccacacaaAAGACATACCAAATTCTTGTTGGTGAAATCCTCAACAAATATATAATCAGCTTCTCTTGA 1821 0.1499 MALFIKFFNSSLTSLMLRFILLLVLSFRTKAVVKLPPNITFPAVIAFGDSIVDPGNNNMVKTLVKCDFPPYGKDFEGGIPTGRFCNGKIPSDLLAEELGIKELLPAYLDPNLKPSDLVTGVCFASGASGYDPLTPKIASVISMSEQLDMFKEYIGKLKHIVGEDRTNFILANSFFLVVAGSDDIANTYFIARVRQLQYDIPAYTDLMLHSASNFVKELYGLGARRIGVLSAPPIGCVPSQRTLAGGLQRECAEEYNYAAKLFNSKLSRELDSLKHNLPNSRIVYIDVYNPLMDIIVNYQRYGYKVVDRGCCGTGKLEGGIPTGRFSNGKVPADFIAEELGISEYITPYKSPSLQPGDLLKGVNFASGGSGYDSLTAQIVSVTPLSEQLEQFKEYIGKLKGNFGEAKTNFILSKSLVLVVSSSNDIANTYFASGVRKVTYDVSGYTDMLVQEASSFVKELYGLGARRIGVFGAPPLGCLPFVRTLFGGLERVCTEEINMASKLFNSKLSSELHNLNQSLPQAKVVYIRIYDSLLNIIQNPINYGFDVADRGCCGTGTVEAAFLCNPLDPTTCVDDSKYVFWDSYHPTQKTYQILVGEILNKYIISFS 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00197 606 CDD SGNH_plant_lipase_like 42 321 IPR035669 -
Gma06g00197 606 PANTHER GDSL ESTERASE/LIPASE EXL3 9 317 - -
Gma06g00197 606 Gene3D SGNH hydrolase 35 319 IPR036514 -
Gma06g00197 606 Gene3D SGNH hydrolase 320 602 IPR036514 -
Gma06g00197 606 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 317 - -
Gma06g00197 606 CDD SGNH_plant_lipase_like 319 601 IPR035669 -
Gma06g00197 606 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 316 603 - -
Gma06g00197 606 Pfam GDSL-like Lipase/Acylhydrolase 44 315 IPR001087 GO:0016788
Gma06g00197 606 Pfam GDSL-like Lipase/Acylhydrolase 322 593 IPR001087 GO:0016788
Gma06g00197 606 PANTHER GDSL ESTERASE/LIPASE EXL3 316 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00197 Gma-Chr6 1717334 1727970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00197 322 598 Pollen Coat Proteome AT1G75910 35.816 2.02e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00197 - - gmx:100793078 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00197 06 1717334 1727970 Gma06g00197 06 1717334 1727970 ECH
Gma04g00214 04 1819136 1821089 Gma06g00197 06 1717334 1727970 GST
Gma17g02479 17 42847944 42852721 Gma06g00197 06 1717334 1727970 PCT
Gma14g02153 14 52686967 52691875 Gma06g00197 06 1717334 1727970 PCT
Gma06g00197 06 1717334 1727970 Gma17g02477 17 42810631 42815771 PCT
Gma06g00197 06 1717334 1727970 Gma14g02151 14 52651994 52661114 PCT