Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00192 ATGGTTACCACCACCGTTGATTCTTCCTCTAACCATCACTCACCCACTGCTGCTGATACCTCTAATAATTTCCCGCAAAAAACCATGCCATCTCCGTGGGCTCAGGTCGTTCGCGGTGCCGACGCTGAACCCAACGATCAATCGCCGCCATCTTCTTCCTCTTCCTCGTCCCTCGATTCCATTAATTCTAACGGTCCCGCCGTTCAAACAAGCGATATCGCCGTGAAACCTGCGTGGAAGAAACCGGAGGCCAATGGCGTCGCCGAAGTTGGGCCTGTAATGGGCGCTCATTCTTGGCCCGATTTATCCGAGTCCACCAAGCCCACCGCTAAATTGACATCTGACTCCTCTGTTAAGACTGCTGCTGATGAAGAGTCAACCACCACTCCTCAGGGTCCTGTTACTTCAGACCCCCCTCAGAAACAAGCCACTGCTAATGCAAAACCTAGTCCTACTCCTGCAATGAACTATGGTATGGCTAATAGACAAAGATCAATGAAGCAGCGTGGAGGGGCAAATGGCAATAATGTTGGGTCTGGTCCTGTTCAGAACAACTTCTCTGGTACTACCCCAAATCTTCCTCCACCACCACCTCCGCCCCCCTTTCCTGTTCTTCTGATGCCTCCAAGTACATTTGCCCATGGGATACCAGGGGCTCCTGTTCCTACTCCAAGGGATCCTTACAGGAACAATAACTGGGATGCAAGACCTCAACATGGGGGTTTTATGCCACCAATGAATGAGCATCGGAGTCCCTCTCACAGGGGCAATGCTGGGCACCATCCACGTGGAGAAGGTCCCTATCACAACAGTTATGGCAACAGGCGCGATCAGGACCGTGTAGGTTATGCAAATACTAGAGATGCTCATGTAAATCAACAGAGGATGCCTCCAAGGGGATTAATGAGGCCCCCACCACCTAATCCTGCTCCATTTATGGGGCCTCAGCCTATGCGACCCCTTGCAAACCCTGCTGGGTTTCCTGAATACTATTATTTCCCAACACTTCAATTTGAACCCTTTGGGGGCATGCCATTTTTCACACATGCACCTCCTCCTGCGATGTTCTACCCGGTTGCAGAAACTCCTCTCACCAATACAATAGCCAACCAAATTGATTATTACTTTAGTGATGCTAATTTAGTGAAGGATGAGTATTTAAGGTCCAACATGGATGAACAGGGATGGGTTCCTATTTCTTTGATTGCAAGCTTCCCACGTGTTAGAAGTTTGACAAGCAACATTAAGTTGATATTGGATTCATTGAGAACTTCCACTTTTGTGGAAGTGCAGGGGGACAAGTTGAGGAGGCGCACTGAGTGGATGAAGTGGCTTCCGTCTGTTCAGCTTCTGGCCAAGTCTGGCTCAATATCCCCTAGCGAATCAAGTTCTAATAACCTAGCAGCTGATTTTGAAAAGATCACAGTGGATGATGCTAAAGTTAACGCCAAGCCTACGGCAAATGATGATGCTGCAGGAGAGTCCTCAACTCAGTCCCAAGTCCCAAATGATGCTACTACTGTGAGCAGCAATTAA 1536 0.4889 MVTTTVDSSSNHHSPTAADTSNNFPQKTMPSPWAQVVRGADAEPNDQSPPSSSSSSSLDSINSNGPAVQTSDIAVKPAWKKPEANGVAEVGPVMGAHSWPDLSESTKPTAKLTSDSSVKTAADEESTTTPQGPVTSDPPQKQATANAKPSPTPAMNYGMANRQRSMKQRGGANGNNVGSGPVQNNFSGTTPNLPPPPPPPPFPVLLMPPSTFAHGIPGAPVPTPRDPYRNNNWDARPQHGGFMPPMNEHRSPSHRGNAGHHPRGEGPYHNSYGNRRDQDRVGYANTRDAHVNQQRMPPRGLMRPPPPNPAPFMGPQPMRPLANPAGFPEYYYFPTLQFEPFGGMPFFTHAPPPAMFYPVAETPLTNTIANQIDYYFSDANLVKDEYLRSNMDEQGWVPISLIASFPRVRSLTSNIKLILDSLRTSTFVEVQGDKLRRRTEWMKWLPSVQLLAKSGSISPSESSSNNLAADFEKITVDDAKVNAKPTANDDAAGESSTQSQVPNDATTVSSN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00192 511 SUPERFAMILY "Winged helix" DNA-binding domain 355 446 IPR036390 -
Gma06g00192 511 MobiDBLite consensus disorder prediction 1 30 - -
Gma06g00192 511 MobiDBLite consensus disorder prediction 478 511 - -
Gma06g00192 511 Pfam La domain 368 423 IPR006630 -
Gma06g00192 511 MobiDBLite consensus disorder prediction 270 284 - -
Gma06g00192 511 SMART la 362 440 IPR006630 -
Gma06g00192 511 MobiDBLite consensus disorder prediction 102 189 - -
Gma06g00192 511 CDD LAM 368 438 - -
Gma06g00192 511 MobiDBLite consensus disorder prediction 248 319 - -
Gma06g00192 511 MobiDBLite consensus disorder prediction 1 201 - -
Gma06g00192 511 Gene3D - 357 446 IPR036388 -
Gma06g00192 511 MobiDBLite consensus disorder prediction 45 70 - -
Gma06g00192 511 MobiDBLite consensus disorder prediction 489 511 - -
Gma06g00192 511 MobiDBLite consensus disorder prediction 299 319 - -
Gma06g00192 511 PANTHER LUPUS LA PROTEIN-RELATED 8 507 IPR045180 -
Gma06g00192 511 ProSiteProfiles La-type HTH domain profile. 358 447 IPR006630 -
Gma06g00192 511 PANTHER LA-RELATED PROTEIN 1B 8 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00192 Gma-Chr6 1676596 1681672 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00192 K18757 - gmx:100792549 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00192 06 1676596 1681672 Gma06g00192 06 1676596 1681672 ECH
Gma04g00206 04 1752932 1758604 Gma06g00192 06 1676596 1681672 GST
Gma17g02481 17 42867458 42871583 Gma06g00192 06 1676596 1681672 PCT
Gma14g02155 14 52698217 52702624 Gma06g00192 06 1676596 1681672 PCT
Gma06g00192 06 1676596 1681672 Gma17g02481 17 42867458 42871583 PCT
Gma06g00192 06 1676596 1681672 Gma14g02155 14 52698217 52702624 PCT