Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00190 ATGGCTAAAGTCATGTTTGTTTTGGTCAGCTTCCTCGTATTATGTTGTTACACAATCAACACTTGCGCCTTCTCATCTTCTGGATGGACCAATGCCCATGCCACTTTTTATGGAGGTAGCGATGCCTCTGGGACAATGGGAGGAGCTTGTGGGTATGGGAATCTGTATTCGACAGGGTACGGAACTGATACAGCAGCATTAAGTACTGCATTATTCAACGATGGAGCATCGTGTGGGGAGTGCTACAAAATAACATGCGATTATCAAGCAGATCCCAGATGGTGCTTAAAAGGAGCATCAGTAACCATAACTGCCACAAACTTCTGCCCTCCCAATTTTGCTTTGCCCAACAACAACGGAGGGTGGTGCAACCCACCTCTTAAACATTTCGACATGGCTCAACCCGCATGGGAAAAGATTGGTATCTATAGAGGAGGGATCGTGCCCGTCTTATTCCAAAGGGTTCCATGCGCGAGGCAGGGAGGAGTTAGGTTCACTATGAATGGGAACAACTACTTTGAGCTTGTATTGATCACCAATGTGGGAGGAGCTGGATCTATCAAATCTGTGTATATCAAAGGCTCAAAAACTGGATGGATGGCCATGACAAGAAACTGGGGAGAAAATTGGCAGTCCAACGAGTATTTGAATGGTCAATCTTTGTCCTTCAAGGTCACCACCACCGATGGTGTAACTAGACTTTTCCGAGGTGTTGTTCCAGCAAATTGGGCTTTTGGCCAGACTTTCCCTACCCGCGTCCAGTTTTAA 768 0.4635 MAKVMFVLVSFLVLCCYTINTCAFSSSGWTNAHATFYGGSDASGTMGGACGYGNLYSTGYGTDTAALSTALFNDGASCGECYKITCDYQADPRWCLKGASVTITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCARQGGVRFTMNGNNYFELVLITNVGGAGSIKSVYIKGSKTGWMAMTRNWGENWQSNEYLNGQSLSFKVTTTDGVTRLFRGVVPANWAFGQTFPTRVQF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00190 255 PANTHER EXPANSIN 4 255 - -
Gma06g00190 255 SUPERFAMILY PHL pollen allergen 159 250 IPR036749 -
Gma06g00190 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 162 IPR007112 -
Gma06g00190 255 Pfam Lytic transglycolase 64 151 IPR009009 -
Gma06g00190 255 Gene3D - 15 158 IPR036908 -
Gma06g00190 255 PRINTS Expansin signature 59 73 IPR002963 GO:0009664
Gma06g00190 255 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Gma06g00190 255 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Gma06g00190 255 PRINTS Expansin signature 120 137 IPR002963 GO:0009664
Gma06g00190 255 PRINTS Expansin signature 137 150 IPR002963 GO:0009664
Gma06g00190 255 PRINTS Expansin signature 161 173 IPR002963 GO:0009664
Gma06g00190 255 PRINTS Expansin signature 173 194 IPR002963 GO:0009664
Gma06g00190 255 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Gma06g00190 255 PRINTS Expansin signature 237 253 IPR002963 GO:0009664
Gma06g00190 255 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576
Gma06g00190 255 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Gma06g00190 255 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Gma06g00190 255 PRINTS Expansin/Lol pI family signature 145 161 IPR007118 GO:0005576
Gma06g00190 255 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Gma06g00190 255 PRINTS Expansin/Lol pI family signature 237 251 IPR007118 GO:0005576
Gma06g00190 255 Pfam Expansin C-terminal domain 163 240 IPR007117 -
Gma06g00190 255 SUPERFAMILY Barwin-like endoglucanases 28 180 IPR036908 -
Gma06g00190 255 Gene3D - 162 255 IPR036749 -
Gma06g00190 255 PANTHER EXPANSIN-A15 4 255 IPR002963 GO:0009664
Gma06g00190 255 SMART dpbb_1 64 152 IPR007112 -
Gma06g00190 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 172 251 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00190 Gma-Chr6 1661724 1667169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00190 64 255 Expansin Gene Family AT1G20190 80.729 7.33e-119 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00190 - - gmx:100792023 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00190 06 1661724 1667169 Gma06g00190 06 1661724 1667169 ECH
Gma04g00203 04 1735939 1737936 Gma06g00190 06 1661724 1667169 GST
Gma17g02485 17 42895333 42897384 Gma06g00190 06 1661724 1667169 PCT
Gma14g02159 14 52735742 52737646 Gma06g00190 06 1661724 1667169 PCT
Gma06g00190 06 1661724 1667169 Gma17g02485 17 42895333 42897384 PCT
Gma06g00190 06 1661724 1667169 Gma14g02159 14 52735742 52737646 PCT