Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00152 ATGATGGGAGATGGTGGTGTGATATCATCTGCTGCTACCATGATGGAAGCTCCACCACCTGATGGAACAACAACAACTTCAATGGATTTTGATTACATGGGTGAGCTTTTCTTAGATGGGTGCTGGATGGAGGCCTCTGCTGATGGATCTGATTTCTTGCTGCAAAGTCCTTCATTTTCCAATACCCTCTTTGACCCTTCATTCTCCTGGCCTGCCTTGGAGACCAACCACAATGAATCCCAGGTTGCTGCTTTTGGGAGTCAACAAGAAAGTCATAATAACAACATGGTTAGTGTTGTTGCTGGTGGTGATTATAGTCAGCAGTTTCAGTCTGAGACTCATTCAGTTGAAGGTGCATCTGAAGGTATCAGAAGGTGGTGGTTTGCACCCACACACACTCCCACACCTAGTCCAGGACCTGGGCCTTCTATAATGGAGAAGCTAATAAGGGCCCTCATGTGGATCAAAGATTACAATAGGAACAAAGATATGCTTATACAGATTTGGGTGCCAGTTCATAAAGAGGGTAGGCCGATTCTTGCAGCCGATGATCTTCTGTTCTCGCTTGAATCCAAGTCTCTGAACCTTGCCAAGTACCGCGAAATCTCTGTGACATATAAGTTCTCTGCAGAGGAGAGTGACTCCAAGGAGTTGGCGTGGGGATTGCCCGGTCGAGTGTTTAGGGACAAGGTTCCTGAGTGGACTCCTGATGTTAGATTCTTTAAAATTGATGAGTATCCAAGAGTTGACCATGCTCAAGAGTATGATGTGCGTGGAACGTTGGCAGTTCCAATCTTTGAGCAAGGAAGCAAGACGTGCTTGGGGGTTATTGAGGTTGTGATGACTACTCAGCAGATTAACTATGGCCCTGAACTTGAGAGTGTTTGCAAAGCACTTGAGGCTGTTGATCTTAGAAGCTCAAAACAATTAAGTATTCAGAATGTGAAGGCATGCAACAGGTCCTATGAAGCTGCACTACCTGAGATTCATGAGGTGCTGAGATCTGCTTGTGAAATGCACAAATTACCTTTAGCTCAAACTTGGGTCCCATGTGTCCAACAAGGCAAAGAGGGGTGCCGGCACTCTGAAGATAATTATCTACTCTGCATATCTCCTGTGGAGCATGCTTGCTATGTTGGTGATCCTTCTATTAGGTCATTTCACGAGGCTTGCACTGAGCATCACTTGTTAAAAGGTGAGGGTGTTGCTGGGGGAGCTTTCATGACAAACCAGCCGTGCTTCTCAGATGATATAACTTCCTTAAGCAAGAAAGACTATCCAATGTCTCATCACGCGAGGTTGTTTGGATTGCGCGCTGCTGTTGCTATACGCCTTCGAAGCATCTATAATAGCACAGATGACTTTGTTCTAGAGTTCTTCTTGCCCGTAGATTGCAATGACATTGAAGAACAGAGAAAGATGCTTACTTCATTGTCCAACATTATACAAAGGGTTTGTCGCAGCTTGCGCGTTATAAGAGAAAAGGAATTGGAGGAAGCTAACTTGTCAGTTAATGAAGTGATAGCCCTTGCAGACAGTGGATTTACTAGGGATGAAATTTGTTCGGAACCCCAACAAAAAGGGATGGTTGCCTCATTGGATACTGAAGAAAAATCAAGTGAAACAATGGGTAGAAAATTCTCTGAACCAAGGCAGCAACAAGAAAGTCCTATTTTAAAAGGAAACCTTGACTGTGTTAGGGAGTGTTCTACGTCTGTTGAGGGTAACTTATCAAGTCCGGGAACAAGTAAAACTGGAGAGAGAAGACGGGTTAAAGCAGAGAAAACTATAACTTTGCAAGTTCTTAGACAATATTTTGCTGGAAGCCTAAAAGATGCTGCCAAGAATATTGGTGTTTGTACTACAACTTTGAAAAGGATCTGCCGGCAGCATGGGATAAAGCGTTGGCCTTCTCGAAAGATCAAAAAGGTTGGCCACTCCTTACAAAAACTTCAACTTGTCATCGACTCGGTTCAAGGTGCCTCTGGTGCATTTCAAATCAATTCCTTCTATTCAAACTTCCCGGATCTAGCTTCTCCAAATTTATCAGGAACTGGCTTCTTCTCAACTTTGAATCAAAGTGATAATCCAAACTCAACAAGCACGCAGCCTGAACATGGCTCATTGAGCCCAGAAGGTGCATCAAAATCACCCTCTTCGTCGAGCAGCCAGAGTTCCATTTCAAGCCATTCCTGCTCTAGCATGTCAGAGCTACAACAGCAGCACACAACTAACATTGCCAGTGACAAAGATCCTGCCACGGTTGGTGAATATTCTGCTGATGTTGTGTTGAAGTTGATCAGAAACGAGGCAAAGCTTAAAAGCCTTAGTCAAGATAGAGCAAAGCTCTTGCCAAGATCACTGAGCCAGGAAACACTTGGTGAACACCCGAAAACTCAGTATCAACTGCCTTTATTGAAAACCAGTAGCAGCAAGGTGGATTCTCACAGAGTAAAAGTCACATATGGAGATGAGAAAACCCGGTTTCGGATGCTGAAAAATTGGGTCTATGAAGATCTTCTGCAGGAAATTGGTAGGAAATTTAATGTGAGTGACATGAGCAAATTTGATGTCAAATACTTGGATGATGATTGTGAGTGGATACTACTCACTTGTGATGCTGATTTAGAGGAGTGCATTGATGTTTGTCAATCTTCCGAGAGTGGTACCATCAAACTTAGTCTACAACCTTCTAGTCATAGTGTGAGAAGTTCTTTAGAATTTAGATAA 2730 0.4352 MMGDGGVISSAATMMEAPPPDGTTTTSMDFDYMGELFLDGCWMEASADGSDFLLQSPSFSNTLFDPSFSWPALETNHNESQVAAFGSQQESHNNNMVSVVAGGDYSQQFQSETHSVEGASEGIRRWWFAPTHTPTPSPGPGPSIMEKLIRALMWIKDYNRNKDMLIQIWVPVHKEGRPILAADDLLFSLESKSLNLAKYREISVTYKFSAEESDSKELAWGLPGRVFRDKVPEWTPDVRFFKIDEYPRVDHAQEYDVRGTLAVPIFEQGSKTCLGVIEVVMTTQQINYGPELESVCKALEAVDLRSSKQLSIQNVKACNRSYEAALPEIHEVLRSACEMHKLPLAQTWVPCVQQGKEGCRHSEDNYLLCISPVEHACYVGDPSIRSFHEACTEHHLLKGEGVAGGAFMTNQPCFSDDITSLSKKDYPMSHHARLFGLRAAVAIRLRSIYNSTDDFVLEFFLPVDCNDIEEQRKMLTSLSNIIQRVCRSLRVIREKELEEANLSVNEVIALADSGFTRDEICSEPQQKGMVASLDTEEKSSETMGRKFSEPRQQQESPILKGNLDCVRECSTSVEGNLSSPGTSKTGERRRVKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGAFQINSFYSNFPDLASPNLSGTGFFSTLNQSDNPNSTSTQPEHGSLSPEGASKSPSSSSSQSSISSHSCSSMSELQQQHTTNIASDKDPATVGEYSADVVLKLIRNEAKLKSLSQDRAKLLPRSLSQETLGEHPKTQYQLPLLKTSSSKVDSHRVKVTYGDEKTRFRMLKNWVYEDLLQEIGRKFNVSDMSKFDVKYLDDDCEWILLTCDADLEECIDVCQSSESGTIKLSLQPSSHSVRSSLEFR 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00152 909 CDD PB1_NLP 816 897 IPR034891 -
Gma06g00152 909 Gene3D - 813 898 - -
Gma06g00152 909 Gene3D - 172 302 IPR029016 -
Gma06g00152 909 ProSiteProfiles PB1 domain profile. 815 898 IPR000270 GO:0005515
Gma06g00152 909 SMART PB1_new 815 898 IPR000270 GO:0005515
Gma06g00152 909 PANTHER PROTEIN NLP4 25 905 - -
Gma06g00152 909 MobiDBLite consensus disorder prediction 1 23 - -
Gma06g00152 909 ProSiteProfiles RWP-RK domain profile. 581 664 IPR003035 -
Gma06g00152 909 Pfam PB1 domain 816 897 IPR000270 GO:0005515
Gma06g00152 909 SUPERFAMILY CAD & PB1 domains 815 900 - -
Gma06g00152 909 MobiDBLite consensus disorder prediction 688 750 - -
Gma06g00152 909 Pfam RWP-RK domain 596 644 IPR003035 -
Gma06g00152 909 PANTHER PROTEIN NLP8 25 905 IPR045012 GO:0003700
Gma06g00152 909 MobiDBLite consensus disorder prediction 688 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00152 Gma-Chr6 1358079 1361897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00152 28 900 NLP Transcription Factor Family AT1G20640 48.832 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gma06g00152 PB1 9.3e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00152 - - gmx:100785135 1768.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00152 06 1358079 1361897 Gma06g00152 06 1358079 1361897 ECH