Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00150 ATGCTCATGGGAAACTGTTTCAGAAAGACCACCAATAATCCACGCCCTTCTCCCCCAGTATCTGCGACCAGAAACTTCAGACCAGACACGAATCTTATAAATTACACGTTGGATGAGTTGAAAAGTGCGACCAGAAACTTCAGACCAGACACGGTCCTAGGCGAGGGTGGTTTTGGACGTGTTTTCAAAGGGTGGATTGATAAGAACACCTTCAAGCCCTCAAGAGTTGGTGTTGGAATCCCCGTGGCTGTGAAGAAGTCTAACCCCGATAGCCTCCAGGGTCTACAAGAATGGCAGAGTGAAGTGCAATTTTTGGGGAAATTCTCTCATCCAAACCTGGTTAAACTTATTGGCTACTGTTGGGAGGAAAATCACTTCCTACTCGTATACGAATACATGCAAAAGGGAAGCCTTGAAAGCCACCTCTTCAGAAGTGGCCCAGAACCTCTTTCATGGGATATAAGACTCAAGATAGCCATAGGAGCCGCCAGAGGTCTAGCTTTCTTGCACACATCAGAAGAGTCTGTCATCTATAGAGACTTCAAGTCCTCTAACATTTTGCTTGATGGGGATTTTAATGCGAAACTATCAGACTTTGGGTTGGCAAAGTttggccccgtcaatggaatatctcacgtaaccacgcgggttatgggcacctatggttacgcagccccagaatacatggctacagGTCATCTCTATGTTAaaagtgatgtatatggatttggcgttgttctgctagaaatgctaacaggtagGGCAGCTCTAGACACAAATCAGCCCGCGGGTATGCAGAATTTGGTGGAGTGCACTATGTCATGTCTACATGACAAAAAGAGACTGAAAGAGATAATAGACCCAAGGATGAACGAGCAATATTCATTAAGGGCTGCATTTCAAATAGCTCAACTTGTTTTAAAATGTTTAGAAACTGACCCAAAGAAACGACCGTCTACAAAAGAGGTTTTGGGAACCCTAGAAAAAGCTCGAGCCATAAAATACAAACCCAAAGGAAAGAAAGTCTGTCAAACAAGTCAGCGTCGGTCACCATCGATTCATTACAACAATGGCTACCCCAAATCACGAACTAATTCTCCTCCACAATAA 1110 0.3847 MLMGNCFRKTTNNPRPSPPVSATRNFRPDTNLINYTLDELKSATRNFRPDTVLGEGGFGRVFKGWIDKNTFKPSRVGVGIPVAVKKSNPDSLQGLQEWQSEVQFLGKFSHPNLVKLIGYCWEENHFLLVYEYMQKGSLESHLFRSGPEPLSWDIRLKIAIGAARGLAFLHTSEESVIYRDFKSSNILLDGDFNAKLSDFGLAKFGPVNGISHVTTRVMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGRAALDTNQPAGMQNLVECTMSCLHDKKRLKEIIDPRMNEQYSLRAAFQIAQLVLKCLETDPKKRPSTKEVLGTLEKARAIKYKPKGKKVCQTSQRRSPSIHYNNGYPKSRTNSPPQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00150 369 MobiDBLite consensus disorder prediction 1 22 - -
Gma06g00150 369 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 32 350 - -
Gma06g00150 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Gma06g00150 369 ProSiteProfiles Protein kinase domain profile. 47 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00150 369 MobiDBLite consensus disorder prediction 344 363 - -
Gma06g00150 369 MobiDBLite consensus disorder prediction 337 369 - -
Gma06g00150 369 CDD STKc_IRAK 53 329 - -
Gma06g00150 369 Gene3D Phosphorylase Kinase; domain 1 31 132 - -
Gma06g00150 369 Gene3D Transferase(Phosphotransferase) domain 1 133 350 - -
Gma06g00150 369 ProSitePatterns Protein kinases ATP-binding region signature. 53 86 IPR017441 GO:0005524
Gma06g00150 369 Pfam Protein tyrosine and serine/threonine kinase 51 325 IPR001245 GO:0004672|GO:0006468
Gma06g00150 369 SUPERFAMILY Protein kinase-like (PK-like) 25 328 IPR011009 -
Gma06g00150 369 PANTHER OS01G0588500 PROTEIN-RELATED 32 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00150 Gma-Chr6 1317737 1321168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00150 35 327 Glycoside Hydrolase AT3G07070 48.649 5.06e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma06g00150 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00150 - - gmx:100784079 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00150 06 1317737 1321168 Gma06g00150 06 1317737 1321168 ECH