Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00146 ATGCATAACTCCACCCTCACCACCTATGTAGTTGTCGGTGATGATAGGTGTCACAATTTTCACATGTTGGCGAGGATGAGGGGTGGAGAAAACATCATTTTGGAGGCGTTGGGTGATGTCATTGAGCATTGTGGCAAGGTTCAAGGAGAAGGAGTGGCCACTAATGACGACTTCCTAGGCACGGTGAACGCGTGCAACGACAACAAGTTTCATGGTTTCAGTGATCTTTCTGTGTGGGTTGAGAGGGAAAACATTGAATTGGAGAATGAGGGGCTTAATATCTCCCCTCACTTGTGCCTAGCCTTATGTCATAGTATTATCATTCATTCTCATCTTTCTCTCTTCTCTCTCCACCCAAACCCTAACTCCCGACCCTGTTCCCCTCTCGTATCCGTCATGAAAGGAGGAAAGTCCAAGACCGAATCTAAGAGAGCCGATCCCAAACTTGCTGTGAATAAGAAGGGAGCCGCCACCAAGGCTAGGAAACCCGCCGGCAAGGGGAAGGCAGCGAAAGACCCTAACAAGCCAAAGAGGCCTCCAAGTGCTTTCTTCGTTTTCATGGAGGAGTTCAGGAAGGTATTCAACAAAGAACATCCTGAAAACAAAGCAGTGTCTGCTgtgggcaaagctgctggagcaaaatggaagaccatgtctgatgctGAAAAAGCACCTTATGTGGCAAAGTCTGAGAAAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCCTATAACAAGAAACAGGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTGAGGTGAATGATGAAGATGATGATGAGGAAGGCAGTGGCGAGGAAGAGGATGACGATTAG 855 0.4491 MHNSTLTTYVVVGDDRCHNFHMLARMRGGENIILEALGDVIEHCGKVQGEGVATNDDFLGTVNACNDNKFHGFSDLSVWVERENIELENEGLNISPHLCLALCHSIIIHSHLSLFSLHPNPNSRPCSPLVSVMKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGPTGGDEEESEKSVSEVNDEDDDEEGSGEEEDDD 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00146 284 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 133 283 IPR031061 -
Gma06g00146 284 CDD HMGB-UBF_HMG-box 176 242 - -
Gma06g00146 284 PANTHER HIGH MOBILITY GROUP B PROTEIN 2-RELATED 133 283 - -
Gma06g00146 284 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 176 245 IPR009071 -
Gma06g00146 284 Coils Coil 227 247 - -
Gma06g00146 284 Gene3D High mobility group box domain 159 254 IPR036910 -
Gma06g00146 284 SMART hmgende2 175 246 IPR009071 -
Gma06g00146 284 MobiDBLite consensus disorder prediction 210 284 - -
Gma06g00146 284 MobiDBLite consensus disorder prediction 128 180 - -
Gma06g00146 284 Pfam HMG (high mobility group) box 176 245 IPR009071 -
Gma06g00146 284 MobiDBLite consensus disorder prediction 225 261 - -
Gma06g00146 284 MobiDBLite consensus disorder prediction 262 284 - -
Gma06g00146 284 SUPERFAMILY HMG-box 164 250 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00146 Gma-Chr6 1281869 1285598 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gma06g00146 HMG_box 3.6e-23 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00146 K25507 - gmx:547975 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00146 06 1281869 1285598 Gma06g00146 06 1281869 1285598 ECH