Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00144 ATGGAAGCAGAGCATCATCACCAGACCTCAAACGCTGGTGGTATTATTGGAGGCCTTTACGTCAAAGTTATGACCGACGATCAAATGGAACTGCTCAGGCAACAGATTTCTGTCTATGCCACCATCTGTCAACAGCTCGTTGAGATGCACAAGGCCGTAACTACCCAACAGGACCTCGCAGGGCTGAGGCTGGGTAATTTGTACTGTGATCCGTTGATGGCGTGCTCTGGACACAAGATAACTGCGAGGCAGCGCTGGACTCCAACACCTCTGCAGCTTCAAGTACTTGAGCGTATTTTTGACGAGGGAAATGGTACTCCGAGCAAGCAGAAGATCAAGGACATAACCATTGAACTTGGCCAACATGGCCAAATATCAGAGACAAATGTTTATAACTGGTTCCAGAACAGAAGAGCTCGTTCAAAGCGGAAGCAACTCACTCCCGCACTGAATGTTGTGGAACCAGAAGTGGAGACAGAAGTTGAAGTTGAGTCTCCAAAAGAGAAAAAGACTCGTGCAGAAGGCTTTCAGGTTCAGCCCTATGAGAATTCGTCACCTCATAGGATCAAGGATATGTACATCCAGAGTCCTGACATAGGATTTGACCAATTGATGAGTAAAATAGAAGTTGCAGGCTGCTACAGTTCTTATTTTCTTTGA 660 0.4636 MEAEHHHQTSNAGGIIGGLYVKVMTDDQMELLRQQISVYATICQQLVEMHKAVTTQQDLAGLRLGNLYCDPLMACSGHKITARQRWTPTPLQLQVLERIFDEGNGTPSKQKIKDITIELGQHGQISETNVYNWFQNRRARSKRKQLTPALNVVEPEVETEVEVESPKEKKTRAEGFQVQPYENSSPHRIKDMYIQSPDIGFDQLMSKIEVAGCYSSYFL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00144 219 MobiDBLite consensus disorder prediction 163 183 - -
Gma06g00144 219 SUPERFAMILY Homeodomain-like 82 145 IPR009057 -
Gma06g00144 219 SMART HOX_1 81 148 IPR001356 GO:0003677
Gma06g00144 219 Gene3D - 84 148 - -
Gma06g00144 219 ProSiteProfiles 'Homeobox' domain profile. 79 144 IPR001356 GO:0003677
Gma06g00144 219 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 219 IPR044559 GO:0003700
Gma06g00144 219 CDD homeodomain 83 145 IPR001356 GO:0003677
Gma06g00144 219 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 1 219 - -
Gma06g00144 219 Pfam Homeodomain 83 143 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00144 Gma-Chr6 1260927 1262510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00144 5 217 Wox Gene Family AT4G35550 52.016 3.27e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma06g00144 Homeodomain 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00144 - - gmx:100820530 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00144 06 1260927 1262510 Gma06g00144 06 1260927 1262510 ECH