Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00139 ATGCATGATTTGGGAGCTACTATGCCTGTGGGAATGGATTTTCCTCCTCCGTTTACTATGTTAGAGGACAAAGACAGTGCATTTGTGGTGGATGATCAGAAATCAGGGGATATAAAACCAATGACAAAGGGTAAGCCTCCACGCCATGCTTCGGGTTTGAGGCACAGCGTTAGCACCACCAGATTGCTGGCTGTAGCAGATTTGAGTTTGGATGTGGGGGTTACTGGGAGCAAGTCATCTTCTGAAGAAAAGACGGAGTTTCTACCAATATTTCGGTCAGGAAGCTGCGCCGAAAGAGGACCTAAACAATATATGGAAGACGAACACATATGTATAGATAATCTTATTCAGCATATAGGTCCTGCTTCAACTATTCCTTTACCTGGAGCTTTTTATGGGGTGTTTGATGGTCATGGGGGTACAGATGCGGCTTTGTTCATACGAAATAACATCCTCAGATTCATAGTTGAGGACTCCCATTTTCCAACTTGTGTGGGGGAGGCAATTACAAGTGCGTTTCTAAAAGCCGATTTTGCATTTGCAGATTCTAGTTCGCTTGATATCTCTTCTGGCACCACTGCTTTAACTGCCCTTGTATTTGGAAGGACCATGATAGTTGCCAATGCTGGGGATTGTCGAGCTGTACTGGGGAGGCGAGGTAGAGCAATTGAGATGTCAAAAGACCAGAAGCCAGATTGCATTTCGGAGAGGCTAAGGATTGAGAAACTTGGTGGAGTGGTATACGATGGATACTTGAATGGCCAGTTATCTGTTTCCCGTGCCTTAGGAGACTGGCACATGAAGGGTTCCAAGGGTTCTGCCTGCCCCTTGAGTGCTGAGCCAGAGCTGCAGGAAATCAACCTGACCGAGGATGATGAGTTCTTGATTATGGGCTGCGACGGCCTATGGGATGTAATGAGTAACCAATGTGCTGTAACCATGGCAAGGAAAGAATTGATGATACATAATGATCCTCAAAGGTGTTCTAGAGAGCTGGTCAGAGAGGCTCTTAAGCGTAACTCGTGCGATAATTTGACAGTTATCGTGATATGTTTCTCCCCAGATCCTCCTCCTAGGATAGAGACACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAGGCCTCAATTTACTTAAGGATGTATTGGACTGTTAG 1158 0.4577 MHDLGATMPVGMDFPPPFTMLEDKDSAFVVDDQKSGDIKPMTKGKPPRHASGLRHSVSTTRLLAVADLSLDVGVTGSKSSSEEKTEFLPIFRSGSCAERGPKQYMEDEHICIDNLIQHIGPASTIPLPGAFYGVFDGHGGTDAALFIRNNILRFIVEDSHFPTCVGEAITSAFLKADFAFADSSSLDISSGTTALTALVFGRTMIVANAGDCRAVLGRRGRAIEMSKDQKPDCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGSKGSACPLSAEPELQEINLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVICFSPDPPPRIETPPSRVRRSISAEGLNLLKDVLDC 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00139 385 CDD PP2Cc 91 352 IPR001932 -
Gma06g00139 385 MobiDBLite consensus disorder prediction 32 53 - -
Gma06g00139 385 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169
Gma06g00139 385 SMART PP2C_4 82 350 IPR001932 -
Gma06g00139 385 Pfam Protein phosphatase 2C 93 344 IPR001932 -
Gma06g00139 385 ProSiteProfiles PPM-type phosphatase domain profile. 92 352 IPR001932 -
Gma06g00139 385 SMART PP2C_SIG_2 107 352 IPR001932 -
Gma06g00139 385 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 8 374 - -
Gma06g00139 385 Gene3D - 70 355 IPR036457 -
Gma06g00139 385 PANTHER PROTEIN PHOSPHATASE 2C 8 374 IPR015655 GO:0004722|GO:0006470
Gma06g00139 385 SUPERFAMILY PP2C-like 86 353 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00139 Gma-Chr6 1218141 1221436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00139 10 384 PP2C-type Phosphatase Gene Family AT2G33700 71.279 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00139 K14803 - gmx:100778015 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00139 06 1218141 1221436 Gma06g00139 06 1218141 1221436 ECH
Gma04g00147 04 1247945 1251325 Gma06g00139 06 1218141 1221436 GST