Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00129 ATGTTGGCAATGGAAGAACTACTGTATGAACTTAGTGATCATGAAAGGAGAAACGAGCAAGGTCTGCCACCGGGTTTCAGGTTTCACCCCACTGATGAAGAACTTGTAACCTTTTACTTGGCTTCAAAGGTCTTTAATGGCACCTTCTCTAACGTCAAGTTTGCTGAGGTTGACCTCAATAGATGTGAGCCTTGGGAACTTCCAGCAGATGTGGCAAAGATGGGGGAGAGAGAGTGGTATCTGTTCAGCTTGAGGGACAGAAAATACCCAACTGGGCTAAGAACAAACAGAGCAACCGGAGCTGGGTACTGGAAAGCCACTGGGAAGGACAAGGAAGTGTACAGTGCATCCAGTGGAACCCTACTTGGAATGAAGAAGACCCTTGTTTTCTACAAAGGCAGGGCCCCTCGTGGTGAAAAGACCAAATGGGTCATGCACGAGTACCGTTTGGTTTTGGATGCTCACTTTTCCCTTCCCCACACTCACCCCTCTAAGGAGGAGTGGGTTATATGCAGGATATTTCATAAATCTGGGGAAAAGAGAAGTCCAGTGCTCCAAGTCCATGGACATTCAGATGCTTCTTCGTCCCCAAGAGAAAGTGCTTTACCTCCATTACTTGCAAGCCCAAGTTGCTTTACATTTGATCCAGAATCTCAATCCCAAAGTTCATCTCATTCTCAGCGAGACTTCCAAAGCCCGGTTCTGATTCACCACCAAGACCAAAATGGCCACTCTCATAACCCTCGTCTTTTCCCATTAGAAATCACCAACGCCAGAAACCACCCATCATCATTTTCGGACCTATTCTTCAAGCCCCTTCAGCAGAATTGCACCCTGAAGACCAACGAACAAACTATTCTTCCAAAAGTAACCAAAACGGAGGACGCTACATTCTATGATCAATATCATCAATTACTAGATGACCATAATAACATGCGCTGGGTGAACAAGTTGAATCAAAATCCAAGCAATTTACTCAACACTTTCCCTTTTGAGGTGGATGCTGGCTTGATGGCATTCTCAGGAGCTGCAAATGCTCAAGTTAAGGACATATCCACTTCAACACCCTTTAATAGGGTAGGCTTGCAGCAGACGCTAGATTCTTGGCCTCTGGCCCAGCATGTTTGA 1128 0.4583 MLAMEELLYELSDHERRNEQGLPPGFRFHPTDEELVTFYLASKVFNGTFSNVKFAEVDLNRCEPWELPADVAKMGEREWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVYSASSGTLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLVLDAHFSLPHTHPSKEEWVICRIFHKSGEKRSPVLQVHGHSDASSSPRESALPPLLASPSCFTFDPESQSQSSSHSQRDFQSPVLIHHQDQNGHSHNPRLFPLEITNARNHPSSFSDLFFKPLQQNCTLKTNEQTILPKVTKTEDATFYDQYHQLLDDHNNMRWVNKLNQNPSNLLNTFPFEVDAGLMAFSGAANAQVKDISTSTPFNRVGLQQTLDSWPLAQHV 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00129 375 Gene3D NAC domain 31 180 IPR036093 GO:0003677|GO:0006355
Gma06g00129 375 ProSiteProfiles NAC domain profile. 22 176 IPR003441 GO:0003677|GO:0006355
Gma06g00129 375 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 315 - -
Gma06g00129 375 Pfam No apical meristem (NAM) protein 23 150 IPR003441 GO:0003677|GO:0006355
Gma06g00129 375 PANTHER PROTEIN CUP-SHAPED COTYLEDON 3 12 315 - -
Gma06g00129 375 SUPERFAMILY NAC domain 17 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00129 Gma-Chr6 1127705 1130003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00129 1 210 NAC Transcription Factor Family AT1G76420 65.278 2.15e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma06g00129 NAM 3.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00129 - - gmx:100780313 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00129 06 1127705 1130003 Gma06g00129 06 1127705 1130003 ECH
Gma04g00136 04 1160360 1162596 Gma06g00129 06 1127705 1130003 GST