Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00124 ATGGCATACCAAGCGATCCAGGTTCCGAGTTCGGGATCGAGTTCGAGTTCGGGGTTTCAGTTATTGAATTCTCCGTTCGGAGACACCACCTACACCAAAGTCTTCGTCGGAGGATTGGCCTGGGAGACTCAGAGCGAAACCATGCGCCGCTACTTCGACCAGTTCGGCGAGATTCTCGAGGCCGTCGTCATCACCGATAAGAACACCGGAAGATCCAAGGGCTACGGTTTCGTGACTTTCCGGGATCCCGAGGCTGCAAGGAGAGCGTGTGCCGATCCAACTCCTGTTATTGATGGCAGAAGGGCCAATTGTAATTTGGCTTCACTTGGTCGACCACGGCCCCCTCTGCCTTATGGACGGATAAGACCTGCCTCCCCTTATGTTGGAAGTTTGCAACCAGCTCGTGGTGCTTATGTTGGGGGTTTTGGCTACCAGCAACAACCAGTTTCCTACAGCTATCAACAAGGATTGGTTTACCCTCCTTATGGGTATACGACATATGGACCTGAGTACATCTACCCACAGAGTCTGTACAACCCATATATGGGGCAACAGTATCTTCAGATATATGGAGTGCCTGGGGCAGTGAATACAACTGTTTATCCTTATGGACAAGTGGGTCAGGCTATTCCTAGTGGTCATGGTTATTCAGCTATACAGGGTTATACAGTACCAGGTCATCAGATTGTGCCCTATGGTGGATCTAATGTTAATGCCATAACAACTTCATCTATGCCTGCCATTCAAGCTTCATATCCTAGTGGAATTGCTGCACCAGTTCCTGGCCAACCACAATTTATTGTTCCTGCTCATTCTCCTCAGTTTATGCAAGGTAGCGGTCCTGATCAAACAGCTGGGTGA 861 0.4948 MAYQAIQVPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGRIRPASPYVGSLQPARGAYVGGFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIYPQSLYNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYGGSNVNAITTSSMPAIQASYPSGIAAPVPGQPQFIVPAHSPQFMQGSGPDQTAG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00124 286 PANTHER BOULE-RELATED 1 282 IPR037366 GO:0003729
Gma06g00124 286 PANTHER RNA-BINDING PROTEIN 38-LIKE ISOFORM X1 1 282 - -
Gma06g00124 286 SUPERFAMILY RNA-binding domain, RBD 7 121 IPR035979 GO:0003676
Gma06g00124 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 109 IPR000504 GO:0003723
Gma06g00124 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 90 IPR000504 GO:0003723
Gma06g00124 286 CDD RRM_RBM24_RBM38_like 32 107 - -
Gma06g00124 286 Gene3D - 4 116 IPR012677 -
Gma06g00124 286 SMART rrm1_1 33 105 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00124 Gma-Chr6 1093731 1098620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00124 21 165 C2H2 Transcription Factor Family AT2G19380 32.692 1.10e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00124 - - gmx:100779244 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00124 06 1093731 1098620 Gma06g00124 06 1093731 1098620 ECH
Gma04g00131 04 1125405 1130504 Gma06g00124 06 1093731 1098620 GST