Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00122 ATGGCTGCTAATTACAACAACAATATCATTAGTGCTGCTGCTGCTGCTGCTGCTTTCATGACACCTGCAGCCCTACACCTCCAGCCCCAGTCCGACGACGACGACGGAGAAGGACCCTTCTCCACCCAGCGGCGCCCTCGCGGGCGGCCCATGGGCTCCAAGAACAAGCCCAAGCCACCCGTCATAGTCACGCGCGACAGCCCCAACGTCCTCCGCTCGCACGTTCTTGAGGTCTCCTCCGGCGCCGACGTGGTGGAGAGCCTCTCCAACTATGCGCGCCGCCGAGGGAGGGGAGTGTCCGTGCTCAGTGGCTCCGGCACGGTGGCCAACGTCGTGCTCCGTCAACCGGCCGGGAGCGTCCTCACGCTCCACGGCCGGTTTGAGATAGTTTCCATGACGGGGACGGTGCTCCCGCCTCCGGCGCCACCCGGTTCGGACGGGTTGTCGGTTTATCTGTCAGGGGCGCAGGGACAGGTGGTTGGGGGCGTGGTGGTGGCCCCTCTGGTGGCTTCGAGTCACGTGGTTTTGGTGGCTGCTTCCTTCGCTAACGCCATGTTCGAAAGGTTACCCTTGCCCTTGAATCAGCATGATGATGATGATCAAGTTCTGCAAGAGGCACCACGTGGCGTCATGGGAACTGAACAGGTGGCAGATGGAAGGAACTATCCCTTCTCCGCGTCGCTGCAGGGTGAAGTATTTGGATGGGGTGGAACTGGAACTACATCATCAACATCAACTGCACCACCCAAAACTCATCCTTTCTAG 765 0.6052 MAANYNNNIISAAAAAAAFMTPAALHLQPQSDDDDGEGPFSTQRRPRGRPMGSKNKPKPPVIVTRDSPNVLRSHVLEVSSGADVVESLSNYARRRGRGVSVLSGSGTVANVVLRQPAGSVLTLHGRFEIVSMTGTVLPPPAPPGSDGLSVYLSGAQGQVVGGVVVAPLVASSHVVLVAASFANAMFERLPLPLNQHDDDDQVLQEAPRGVMGTEQVADGRNYPFSASLQGEVFGWGGTGTTSSTSTAPPKTHPF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00122 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 38 237 - -
Gma06g00122 254 MobiDBLite consensus disorder prediction 27 67 - -
Gma06g00122 254 CDD DUF296 72 153 IPR005175 -
Gma06g00122 254 ProSiteProfiles PPC domain profile profile. 68 208 IPR005175 -
Gma06g00122 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 237 IPR014476 GO:0003680
Gma06g00122 254 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 182 IPR005175 -
Gma06g00122 254 MobiDBLite consensus disorder prediction 235 254 - -
Gma06g00122 254 Gene3D - 71 197 - -
Gma06g00122 254 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00122 Gma-Chr6 1083055 1083819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00122 28 191 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 71.910 4.08e-71 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00122 - - gmx:100778715 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00122 06 1083055 1083819 Gma06g00122 06 1083055 1083819 ECH