Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma06g00119 | ATGGAGTTGTTTCCCTCAATCAAGGCACCAACAACCATGCAGTCTGTTTATCCTCGCCACTTGGAAATTCCAACTCTTGTTAATCCAAGGCATGTGATCCTTTTTTTTAGGTCTATGGAGAAGGAGCATAAAGCTGCTCAGTTGACCATCTTCTACAATGGGCAAGTTGTTGTGTTTGATGATTTTCCAGCTGATAAAGTGCAGGAGATGATGTCTTTGGCATTGGCCACCAAGGGAATATCCCAAAGCCAGAACTCCTCTGCATATGCTCACACTCATAACCAGCAAGGAAATAATCATCCTTCGACTATTCCTAATATCATCCCTCAAGCACCATCCACACCAATTGCTAATGACATGCCAATTGGTAGGAAAGCTTCCCTTCATCGGTTCCTTGAGAAGAGGAAAGATAGAATTGCTGCCAAAGCACCATATCAAACAAACAGACCTATCTCTGCTCCTAATAAGCCGGCTGAATCATTAGATGCTAAATCACACACCTGA | 504 | 0.4306 | MELFPSIKAPTTMQSVYPRHLEIPTLVNPRHVILFFRSMEKEHKAAQLTIFYNGQVVVFDDFPADKVQEMMSLALATKGISQSQNSSAYAHTHNQQGNNHPSTIPNIIPQAPSTPIANDMPIGRKASLHRFLEKRKDRIAAKAPYQTNRPISAPNKPAESLDAKSHT | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma06g00119 | 167 | Pfam | Jas motif | 121 | 146 | IPR018467 | - | |
Gma06g00119 | 167 | SMART | tify_2 | 41 | 76 | IPR010399 | - | |
Gma06g00119 | 167 | MobiDBLite | consensus disorder prediction | 85 | 120 | - | - | |
Gma06g00119 | 167 | PANTHER | PROTEIN TIFY 10A | 27 | 159 | - | - | |
Gma06g00119 | 167 | PANTHER | PROTEIN TIFY 4A-RELATED-RELATED | 27 | 159 | IPR040390 | - | |
Gma06g00119 | 167 | MobiDBLite | consensus disorder prediction | 139 | 167 | - | - | |
Gma06g00119 | 167 | ProSiteProfiles | Tify domain profile. | 41 | 76 | IPR010399 | - | |
Gma06g00119 | 167 | MobiDBLite | consensus disorder prediction | 85 | 113 | - | - | |
Gma06g00119 | 167 | Pfam | tify domain | 44 | 74 | IPR010399 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma06g00119 | Gma-Chr6 | 1030804 | 1031660 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma06g00119 | 37 | 157 | Tify Gene Family | AT1G19180 | 43.939 | 1.07e-24 | 94.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Tify | Gma06g00119 | tify | 2.5e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma06g00119 | K13464 | - | gmx:100807356 | 266.929 |