Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00110 ATGGCTTCTGCAGAAGTAGAGTTCCGATGCTTTGTTGGTGGGCTTGCTTGGGCCACCGACCACGATGCTCTCGAGAAAGCCTTCTCTCAATTTGGCGAAATCGTCGAATCGAAGGTCATCAACGATCGTGAAACTGGAAGATCCAGAGGGTTTGGATTTGTGACCTTCGCCACAGAGCAGGCGATGAGAGACGCAATTGAAGGAATGAACGGCCAGAACCTCGACGGTCGTAATATAACCGTGAACGAGGCTCAATCCCGTGGAAAAGGTGGCGGCGGCGGCGGCGGCGGCTACGGAGGAGGTGGTGGTGGTTACGGTGGCGGCGGAGGTTACAGCCGCGGTGGAGGAGGATATGGTGGCGGAGGAGGCCGCCGTGAAGGTGGTTATAACCGCAACGGTggtggaggaggatatggtggcggtggcggcggatatggaggtggtggaggttatggtggcggtggGAGAGACCGTGGATATGGTGGTGATGGTGGGTCCCGCTACTCGAGAGGAGGCGGTGGTTCGGATGGAGGAAGCTGGAGGAATTAA 549 0.5046 MASAEVEFRCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQSRGKGGGGGGGGYGGGGGGYGGGGGYSRGGGGYGGGGGRREGGYNRNGGGGGYGGGGGGYGGGGGYGGGGRDRGYGGDGGSRYSRGGGGSDGGSWRN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00110 182 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Gma06g00110 182 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Gma06g00110 182 MobiDBLite consensus disorder prediction 147 182 - -
Gma06g00110 182 SUPERFAMILY RNA-binding domain, RBD 8 116 IPR035979 GO:0003676
Gma06g00110 182 SMART rrm1_1 9 82 IPR000504 GO:0003723
Gma06g00110 182 PANTHER TRANSFORMER-2-RELATED 1 131 - -
Gma06g00110 182 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN GRP1A-LIKE 1 131 - -
Gma06g00110 182 Gene3D - 2 120 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00110 Gma-Chr6 937065 937871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00110 10 89 Eukaryotic Initiation Factors Gene Family AT4G34110 36.250 8.41e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00110 - K13195 gmx:100777821 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00110 06 937065 937871 Gma06g00110 06 937065 937871 ECH