Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00090 ATGTATCCAATTCTTAGTGAAATCTTCTTTTCCGGGTGGACGTCGTCGGAGCTGCAGGGTATGATGGATCAGAGGAAGAGGAAGAGAATGATATCGAACCGCGAATCGGCAAGGCGATCTCGAATGAGGAAGCAGAAGCACTTGGATGATCTAGCATCGCAGCTGACTCAGCTCAGGAGCCAGAATCAGCAGCTTCTCACGTCTGTGAACCTCACCAGCCACAAGTACTTGGCGGTGGAGGCTGAGAACTCTGTTTTGAGAGCACAAGTGAACGAGCTCAGCCACAGCCTCCCGATTATGGCTTCAGCAGACATGTTGCAGTACTGA 327 0.5107 MYPILSEIFFSGWTSSELQGMMDQRKRKRMISNRESARRSRMRKQKHLDDLASQLTQLRSQNQQLLTSVNLTSHKYLAVEAENSVLRAQVNELSHSLPIMASADMLQY 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00090 108 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 86 IPR004827 GO:0003700|GO:0006355
Gma06g00090 108 Gene3D - 23 78 - -
Gma06g00090 108 PANTHER BZIP TRANSCRIPTION FACTOR 44 16 99 - -
Gma06g00090 108 CDD bZIP_plant_GBF1 26 76 IPR045314 GO:0003700|GO:0006355
Gma06g00090 108 Pfam bZIP transcription factor 25 70 IPR004827 GO:0003700|GO:0006355
Gma06g00090 108 PANTHER BZIP TRANSCRIPTION FACTOR 16 99 - -
Gma06g00090 108 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Gma06g00090 108 SUPERFAMILY Leucine zipper domain 25 76 IPR046347 GO:0003700|GO:0006355
Gma06g00090 108 Coils Coil 48 68 - -
Gma06g00090 108 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Gma06g00090 108 MobiDBLite consensus disorder prediction 21 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00090 Gma-Chr6 809051 809710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00090 19 97 bZIP Transcription Factor Family AT4G34590 63.291 1.94e-31 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma06g00090 bZIP_1 2.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00090 K25786 - gmx:121175032 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00090 06 809051 809710 Gma06g00090 06 809051 809710 ECH
Gma04g00095 04 835254 836251 Gma06g00090 06 809051 809710 GST