Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00084 ATGGCAACTTACTACACAAGTTCGAGTAATGAAAGGGATGCAGTGCCTATGTTGTGTCTTAGGGAACCTTTGCCTGATTCATATCCCGAGACACCAATTTTGCCGAGCAATATGTCATTGTATATGAACTCTGGATCATATTCAGAAGCATTGTCCGGCAATTCTCAGCCGCAAAACAATTGCTTTGTGATTCCATCACCATCAGTAGGTGCATCACATTCCACTCCTGAACAACAAGAAATCTTGGCCAATATTGGTGGGTTCCAAACCGGGGTTCATGATTTCAGTGCATGGAGGGAGGGTAGAAGTGAGATGCTAGTCAGACAAACTATGGATGGACAGAACTTACAAGGTCAGGGATTATCTCTCAGCCTTGGAACCCACATACCCTCAGGAATTCAAATGCCTTCTATCCATGATAGGAATCACAGGCCAAGTTTTGATTCATTTTTGGGTACTAATCCATCAAGTTCGGGCAACGAGGCTGCCTACCAAAAGGGTTCATCTAGAGATGAGGGTATGAGACATTCTGAAAATCTTCCACCTGGCTTACCTGAAGCTAATCAAGATTTGGACAAAGCGGATTTTTCAATTCATAGAATGTCTAGTGTTGGAAGAACAGTTCCTAGCTTCAAATACCTCAAGGCAGTGCAACTACTACTTGATGAAGTTGTTGACATCCGAAAAGCTATTAAAAGACCTGTTGTGAGAAGTTATAGCACACATGAGAACTCTAAGAAGAATTCTAATGAGGATGATGAGCAACTAGAAAATGACAGGCCTTCTGCAAATGGAGTGCCTAATTCTCAAGCTTCAACTAGTAAGACCTCTTGTGAGCTTTCACATGCTGAAAAACAAGATCTGCACCACAAGTTAACAAAGCTTTTGTCAATGTTGGACGAGGTTGACAATAGGTACAAACAATATTATCAGCAGATGCAGATTGTGGTGTCATCATTTGATGTGGTAGCAGGATGTGGAGCAGCTAAACCATACACAGCCCTTGCTCTTCAAACCATTTCATGCCATTTCCGGTGTTTGCGTGATGCAATCACTGGTCAAATCAGTGCAACACAAAAGAACCTTGGAGAGCAAAATGCTTCTGGAAGTAACAAAGGAGTTGGAATGACAAGACTAAAGTACATGGACCAACAAATCCGACAACAGAGAGTTCTTCAGCAGCTTGGCATGATGCAACATGCATGGAGACCACAAAGGGGGCTTCCAGAAAGCTCTGTTGTAATTCTTCGCGCTTGGCTTTTTGAGCATTTTCTTCATCCCTATCCAAAGGATTCTGATAAGATCATGCTAGCAAAACAGACAGGTTTGACCAGAAGTCAGGTCTCAAATTGGTTTATAAATGCGCGTGTGCGTCTATGGAAACCTATGATTGAAGAGATGTACAAGCAAGAGAATTGTGATGCTGACATGGACTCAAGTTCTTCATCTGAAAATGTGTCCAAGGTAACAAAAAGTGATGTCAAGACCTCCAATGATATGGGTGATGATTGGCAGCACTGTCAAAGTCCAATAGTAGCCGATACAAATCACATTGGTGGACAAGCTAAGGACCTTAGACATGATCAGGCTCTTGATACAGAAATTATGTCATCCACTGGATTAGCTATTGTTCAGTCTGATGGAGCTACTAATGAGAGGTTCGTGTCAGTTGGTCCAACATGCAAAATGTCAGAGTTTGAGAGGTTCAAGTCAGGAAGTGGAGTGTCTCTAACATTGGGTTTGCAGCATTGTGAAGGAGGTAATTTTTTGCCTGGTGAGACCCATCTCAGTTTGGTTTCCATGACAACAGAACTTGAGTGCATCGGTGCTGGAAACCAGCAACAAAGGTTCAATTCACCATTTCACCTCATATTAAACATCAAACTTGCACACTGGACACGAACTGCTAGTCCAACGAAATATTATATTTAA 1932 0.4213 MATYYTSSSNERDAVPMLCLREPLPDSYPETPILPSNMSLYMNSGSYSEALSGNSQPQNNCFVIPSPSVGASHSTPEQQEILANIGGFQTGVHDFSAWREGRSEMLVRQTMDGQNLQGQGLSLSLGTHIPSGIQMPSIHDRNHRPSFDSFLGTNPSSSGNEAAYQKGSSRDEGMRHSENLPPGLPEANQDLDKADFSIHRMSSVGRTVPSFKYLKAVQLLLDEVVDIRKAIKRPVVRSYSTHENSKKNSNEDDEQLENDRPSANGVPNSQASTSKTSCELSHAEKQDLHHKLTKLLSMLDEVDNRYKQYYQQMQIVVSSFDVVAGCGAAKPYTALALQTISCHFRCLRDAITGQISATQKNLGEQNASGSNKGVGMTRLKYMDQQIRQQRVLQQLGMMQHAWRPQRGLPESSVVILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMIEEMYKQENCDADMDSSSSSENVSKVTKSDVKTSNDMGDDWQHCQSPIVADTNHIGGQAKDLRHDQALDTEIMSSTGLAIVQSDGATNERFVSVGPTCKMSEFERFKSGSGVSLTLGLQHCEGGNFLPGETHLSLVSMTTELECIGAGNQQQRFNSPFHLILNIKLAHWTRTASPTKYYI 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00084 643 SMART HOX_1 402 466 IPR001356 GO:0003677
Gma06g00084 643 SMART prehox3 202 353 IPR006563 -
Gma06g00084 643 MobiDBLite consensus disorder prediction 147 165 - -
Gma06g00084 643 MobiDBLite consensus disorder prediction 237 282 - -
Gma06g00084 643 MobiDBLite consensus disorder prediction 244 259 - -
Gma06g00084 643 MobiDBLite consensus disorder prediction 261 279 - -
Gma06g00084 643 Pfam Associated with HOX 210 352 IPR006563 -
Gma06g00084 643 MobiDBLite consensus disorder prediction 134 189 - -
Gma06g00084 643 CDD homeodomain 402 463 IPR001356 GO:0003677
Gma06g00084 643 Gene3D - 398 476 - -
Gma06g00084 643 Pfam Homeobox KN domain 419 458 IPR008422 GO:0003677|GO:0006355
Gma06g00084 643 ProSiteProfiles 'Homeobox' domain profile. 399 462 IPR001356 GO:0003677
Gma06g00084 643 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 98 597 - -
Gma06g00084 643 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 98 597 - -
Gma06g00084 643 SUPERFAMILY Homeodomain-like 403 469 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00084 Gma-Chr6 758686 761587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00084 26 619 Homeobox Transcription Factor Family AT4G34610 42.512 1.07e-131 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma06g00084 POX 3.4e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00084 - - gmx:100816667 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00084 06 758686 761587 Gma06g00084 06 758686 761587 ECH
Gma04g00089 04 784995 788210 Gma06g00084 06 758686 761587 GST