Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00054 ATGGTTCTGAATGTTCATCGCGTATATTCTCCTACGCTGAATTCGATAATACTCTTACTTGCTCTCTGCACTTTATCAGGCAATGAATGCACTTCTCCTTTATCTGCTGCTTTTTTTTTTCTTCTTCCATCTTTTCTCCTTTGCTCATTTTCTTCGTTCTCAACCttctttgcagattgctatgacccgttggatcctaatggaaacatttccgtaacttttGACATCCTCGAACGTACTACAGATAATGGATATCTGGCAAGGGTGACCCTTGAAAACTACTATCAATATCGGCATGTAGAGAAACCCGGGTGGAAACTAGGATGGACGTGGGCTAACAATGAAGTGATATGGTCAATGAGTGGTGCCATAGCAACTGATAGAGGGAATTGTTCATCTTACAGTGGTTCTCAGATGCCACATTCATGCAAGAAAGATCCCACCATAGTTGATCTCTCTCTAGATGTCTCGCAAAACAGGTCAGAGCATTGTTGCCGTGGTGGTCTCCTCTCTGCCTGGTCTATTGATCCTTTCAATGCCTTCTCTTCATTTGAACTTGAAGTTCGCAACGTGGGAGATAACAACCCACTTGGACAAGCTCCTAATAATCTTACATTGATGGCCCCAGGTCCTGGTTACACTTGTAGCCCCCTTCTTGACACTGATCTCTCTGTCTCCTCAGATTTTGGGGGACTAAGACAAGTTCCTGTTCTCAGAACTTGGAAGTCAACATGTGCATACTCCAGTTTCATAGCAAACACAATACCGGTATGCTGTGTTTCCCTCTCATCATTTTACAACCCTGCCATCACATCTTGCCGTAATTGCAGTTGTGGATGCAGAGAAGCAGATAAAAGTACAGCATCTTGCATAAGGCCTAGTTCCTTGCCACGGTCTAATGGAGACAACACAATTGATGAAATAATAGAATGCACCGACCACATGTGCCCAGTTCGAGTCCATTGGCATTTCAAGAACAACTATATGAACCAATGGAGGGTGAAGCTTACAGTTTCTAACTACAATTACAACAGAAACTACTCAAACTGGAACGTGCTGGTTCAACATCCTGGTTTCACCCAAAAAGCAAGAACTTACAGCTTCAACAGCACTAGACTTCCTACCCTTGGGCTCCAAGATGGAGTTTCCCTTTTTTGGGGGATAGACTATTACAACAATGAGCTAGTGCATTCTGATAAGGGTGTTGTGGGTCTTGTGACAACAGAAATACTATTGGATAAAGATCCAAATTCTTTCACAGACCAATCAGTGGAAGAAACCATGGCTGCCCAACCCAAACCTCAGAACCGACCCATTTCTAATATCGTCTTCGTCGTTGCTATGCAGACGGAGGCACTTCCCATCGTCAACAGATTCCAGCTCACTGAGGACCCTCACTCCCCATTTCCGCAAGGGGCTCCTTGGGTCCATTATCATGGGACATTCAAAGATCTCAATATAAACTTGATTTGGACTGGGAATGATCCAACTTTGGGGGTTGATAGTATAGGCACGATACCATCTGCTCTTGCAACATATGCTGCTATTCTAGCATTACAACCAGACTTGATCATCAATGCAGGCACCGCTGGTGGCTTCAAGGCCAAAGGAGCTAGTATTGGTGATATTTTTGTTGTATCGGAATGTGCTTTTCATGACAGAAGAATACCTATACCTATTTTTGATCTGTATGGAGTGGGTCTTCGTAAAGCCTTTGAAACACCCAAACTTGTAAAGGAGCTTAATCTAAAGGTGGCTAAATTGTCTACTGGTGACTCTTTAGACATGACACAGCAGGATGGATCATTAATAATTGCAAATGATGCCACAGTTATAGATATGGAGGGAGCTGCTATTGCTTATGTTGCCGACCTACTGAAAGTTCCTGCAATTTTTATAAAAGCCGTGACTAATAACGTTGATGATGACAAAGCAATTGTAGAAGAATTCCTGCAGAATTTGGCAGCTCTAACTGTTGAACTTGGTCTGGCTGTCGAACAAGTTATTAATTTTATCAATGGAAAGTGCATATCTGAACTTTGGCAACCCAATTTCACCTTATCCTAG 2067 0.4165 MVLNVHRVYSPTLNSIILLLALCTLSGNECTSPLSAAFFFLLPSFLLCSFSSFSTFFADCYDPLDPNGNISVTFDILERTTDNGYLARVTLENYYQYRHVEKPGWKLGWTWANNEVIWSMSGAIATDRGNCSSYSGSQMPHSCKKDPTIVDLSLDVSQNRSEHCCRGGLLSAWSIDPFNAFSSFELEVRNVGDNNPLGQAPNNLTLMAPGPGYTCSPLLDTDLSVSSDFGGLRQVPVLRTWKSTCAYSSFIANTIPVCCVSLSSFYNPAITSCRNCSCGCREADKSTASCIRPSSLPRSNGDNTIDEIIECTDHMCPVRVHWHFKNNYMNQWRVKLTVSNYNYNRNYSNWNVLVQHPGFTQKARTYSFNSTRLPTLGLQDGVSLFWGIDYYNNELVHSDKGVVGLVTTEILLDKDPNSFTDQSVEETMAAQPKPQNRPISNIVFVVAMQTEALPIVNRFQLTEDPHSPFPQGAPWVHYHGTFKDLNINLIWTGNDPTLGVDSIGTIPSALATYAAILALQPDLIINAGTAGGFKAKGASIGDIFVVSECAFHDRRIPIPIFDLYGVGLRKAFETPKLVKELNLKVAKLSTGDSLDMTQQDGSLIIANDATVIDMEGAAIAYVADLLKVPAIFIKAVTNNVDDDKAIVEEFLQNLAALTVELGLAVEQVINFINGKCISELWQPNFTLS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00054 688 Pfam COBRA-like protein 85 248 IPR006918 GO:0010215|GO:0031225
Gma06g00054 688 SUPERFAMILY Purine and uridine phosphorylases 442 658 IPR035994 GO:0003824|GO:0009116
Gma06g00054 688 Pfam Phosphorylase superfamily 442 658 IPR000845 GO:0003824|GO:0009116
Gma06g00054 688 PANTHER PROTEIN COBRA 50 420 IPR006918 GO:0010215|GO:0031225
Gma06g00054 688 CDD MTAN 442 656 - -
Gma06g00054 688 PANTHER COBRA-LIKE PROTEIN 50 420 - -
Gma06g00054 688 Gene3D Nucleoside phosphorylase domain 436 680 IPR035994 GO:0003824|GO:0009116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00054 Gma-Chr6 469198 477982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00054 34 420 COBRA Gene Family AT3G29810 47.074 4.13e-118 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00054 - - vra:106760500 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00054 06 469198 477982 Gma06g00054 06 469198 477982 ECH
Gma04g00062 04 488212 496594 Gma06g00054 06 469198 477982 GST