Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00040 ATGCCAACGTTCAACTTTCCAGTCAGCAAGCGTCCCCCATGGTTGGTCAGGGGTGCTGCGTCATTGCCTGCGGAAACTGCTATTGGAACCACGCTCAGTATCAGACACAACAAGAGAAGCTGTCCTGGCTCCTATACTGCAACTGGAACCTTCTTCAACCTTCCGAGACAAACCCACATTGTGGGTATTGAAGCAATGCATAGAGCGATCTCGTTCTTCGTTCAACCGCGATGCCTCCTTCTCATAGGTGTTCTCTCAATTTTCTTGATTCTCGCATTATCGGGTACCAAATGGGTTGAAGAGAAAGAAGAACAACCTGAAATTACAGACAGAGTATTCTTTGATGTTGATATTGATGGACAACGTTTAGGTAGGATTGTCATTGGATTGTATGGCCAAGTTGTACCAAAAACTGTGGAAAATTTTAGAGCTTTGTGCACAGGGGAGAAAGGGAAGAATGCCAGTGGTGGCGGAGATATTGTTCATCATGATGGTAGAGGATACGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATAAAACATTCACATGCTGGTGTAGTCTCTATGGTGAATTCAGGTCCCGATTACAATGGCTCACAGTTTTTTATTACCACAGTGAAGACCGGTTGGTTAGATGGAGAACATGGTGTGTTTGGCAAGGTTGTCCAAGGCATGGATTCTGTGTTTGCAATTGAAGGAGGTGCTGGAACCTACAATGGGAAACCCAGAAAGAAGGTAGTGATTGCAGACTCTGGAGAGATACCCAAGAGTCAGTGGGATAAGGAAAGATGA 804 0.4465 MPTFNFPVSKRPPWLVRGAASLPAETAIGTTLSIRHNKRSCPGSYTATGTFFNLPRQTHIVGIEAMHRAISFFVQPRCLLLIGVLSIFLILALSGTKWVEEKEEQPEITDRVFFDVDIDGQRLGRIVIGLYGQVVPKTVENFRALCTGEKGKNASGGGDIVHHDGRGYESIYGGTFPDENFKIKHSHAGVVSMVNSGPDYNGSQFFITTVKTGWLDGEHGVFGKVVQGMDSVFAIEGGAGTYNGKPRKKVVIADSGEIPKSQWDKER 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00040 267 SUPERFAMILY Cyclophilin-like 107 258 IPR029000 -
Gma06g00040 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 130 145 IPR002130 GO:0000413|GO:0003755
Gma06g00040 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 189 204 IPR002130 GO:0000413|GO:0003755
Gma06g00040 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 204 216 IPR002130 GO:0000413|GO:0003755
Gma06g00040 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 217 232 IPR002130 GO:0000413|GO:0003755
Gma06g00040 267 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 116 255 IPR002130 GO:0000413|GO:0003755
Gma06g00040 267 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 113 257 IPR002130 GO:0000413|GO:0003755
Gma06g00040 267 Gene3D - 97 265 IPR029000 -
Gma06g00040 267 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 87 156 - -
Gma06g00040 267 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 157 266 - -
Gma06g00040 267 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 87 156 - -
Gma06g00040 267 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 157 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00040 Gma-Chr6 366613 370953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00040 124 255 U-box Gene Family AT5G67530 36.806 3.12e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00040 - - gmx:100808240 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00040 06 366613 370953 Gma06g00040 06 366613 370953 ECH
Gma04g00044 04 385412 389850 Gma06g00040 06 366613 370953 GST