Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00006 ATGCTCCTTTGGAGCCTTTGGAGGAAAAGAAATAAAAAGGTCTGGGACAATAAGTTGCTATCCGAATCTAAGGTTATTCAACAAGCTGGTGACATGTTTTATCAGGATTGGATGTCTGCAAAAGATCTTTCTGTTACACGGGGCCATGAGCAGCACAACCATTATCGTGTTCAATGGTCTTGGAAAGCTTTTTATGGCAAGGTCAGAATGGAGGTAGCCTCGTCTGTCAGTGTTGGAAGGAGAAGCATGGGCCTTATGTGTTGGCTGTGCTGTCGCCCCCACCTATATTCAGATTCAATTCAATTTTTCTTTCTTCTTCTTCAGATTCGCATGGAGGGCTCAAAGGAAAACCGTGTGCCTCCGCTTCCGCTCATACCCTCTTCGAATCTTCAACAAGGCGGTGGTCCAAGAATGAAGCGCCTACTCCATCACCATCACCGGCTGCCTCTCGGCAACATCAGTCAGAATGTTATGCCTCATTCTCATGTCAACAAACTAGATCTTGCCCGCAAGTTTACGCCACACACAGTTCAGCACCACTTCCCTCAGCCACATCCACAGCCTCAAGAAAATAAGAAACAGAACCTTTTGGCCCCGACCCCGAGTTACCAGTTAGATTGTGATATCGTAGATATTGATGACGACGATGGGGATGGCAGTGATGATGCCGTTCCGGTATTTGTCAAGCACACTGAAGCCATGCTTGACGAAATTGACAAGATAGAGGAAGTTGAAATGGAAGATGTAGAGGAGGAACCTGTTTTGGACATCGATGCCTGTGATAGGAAAGATACACTGGCAGTGGTTGAGTACATAGATGATATATACAGTTTCTACAAGGATATTGAGAATTCGAGCCGTGTCTCTCCAAATTACATGAATAGTCAATTTGACATTAATGAAAGGATGAGGGCTATTCTTATTGACTGGCTTGTTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACGTTGTTCCTTACTGTCAATCTCATAGACAGGTTCTTGGAGCGTCAGGCAGTGATCAGAAAGAAACTTCAGTTAGTTGGTGTAACAGCCATGCTAATAGCTTGTAAGTATGAGGAGGTCTCAGTTCCTACCGTTGAGGATTTTATTCTCATAACAGACAAGGCATATACAAGAAATGAAGTTTTAGATATGGAGAAATTAATGATGAACATCTTGCAATTCAAGTTGTCTGTGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAGCTGGAGCTCTTGTCCTTCTTCTTGGTCGAGCTTTGCTTGGTAGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTGGCTGCTGCAGCCATTTACACAGCTCAATGTAGTCTGTACCAGTTTAAGCAATGGACTAAGACTACCGAGTGGTACACTGATTACTCAGAAGAGAAACTTCTTGAATGCTCAAGGCTGATGGTTACTTTCCATCAGAAAGCTGGATCGGGGAAACTCACAGGTGTATATAGAAAGTACAATACATGGAAGTATGGCTGTGCCGCGAAAATAGAACCAGCCCTGTTTCTACTGGATAATTAA 1578 0.4328 MLLWSLWRKRNKKVWDNKLLSESKVIQQAGDMFYQDWMSAKDLSVTRGHEQHNHYRVQWSWKAFYGKVRMEVASSVSVGRRSMGLMCWLCCRPHLYSDSIQFFFLLLQIRMEGSKENRVPPLPLIPSSNLQQGGGPRMKRLLHHHHRLPLGNISQNVMPHSHVNKLDLARKFTPHTVQHHFPQPHPQPQENKKQNLLAPTPSYQLDCDIVDIDDDDGDGSDDAVPVFVKHTEAMLDEIDKIEEVEMEDVEEEPVLDIDACDRKDTLAVVEYIDDIYSFYKDIENSSRVSPNYMNSQFDINERMRAILIDWLVEVHYKFELLEETLFLTVNLIDRFLERQAVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLDMEKLMMNILQFKLSVPTPYMFMRRFLKAAHSDKKLELLSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTTEWYTDYSEEKLLECSRLMVTFHQKAGSGKLTGVYRKYNTWKYGCAAKIEPALFLLDN 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00006 525 PANTHER CYCLINS 175 520 IPR039361 -
Gma06g00006 525 Pfam Cyclin, C-terminal domain 402 518 IPR004367 -
Gma06g00006 525 CDD CYCLIN 303 392 IPR013763 -
Gma06g00006 525 CDD CYCLIN 400 487 IPR013763 -
Gma06g00006 525 Gene3D - 274 515 - -
Gma06g00006 525 SMART cyclin_7 406 488 IPR013763 -
Gma06g00006 525 SMART cyclin_7 309 393 IPR013763 -
Gma06g00006 525 SUPERFAMILY Cyclin-like 401 518 IPR036915 -
Gma06g00006 525 Pfam Cyclin, N-terminal domain 274 400 IPR006671 -
Gma06g00006 525 Gene3D - 288 400 - -
Gma06g00006 525 ProSitePatterns Cyclins signature. 304 335 IPR006671 -
Gma06g00006 525 SUPERFAMILY Cyclin-like 264 399 IPR036915 -
Gma06g00006 525 SMART Cyclin_C_2 402 519 IPR004367 -
Gma06g00006 525 PANTHER CYCLIN-B2-3-RELATED 175 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00006 Gma-Chr6 89468 96428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00006 122 523 Core Cell Cycle Gene Families AT1G20610 55.607 3.31e-159 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00006 K21777 - gmx:100812029 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00006 06 89468 96428 Gma06g00006 06 89468 96428 ECH
Gma04g00009 04 101621 106457 Gma06g00006 06 89468 96428 GST