Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02407 ATGGCGGACTCAGTTGATGTGATTTTGGACTTTCTTAGGAGGAATCGTTTCACCAGAGCTGAGGCTGCTTTGCTCACTGAGATCAATAATCTTCCCGACTTGAATGCCAATCCTCAAGGTCTAGAACTCATTGTCAAGGAAATAGAGTGTGGGAATGGTAATGCCCATTTGCAAGCAACTTCTGCTCCCTCTATTCTTTTCTCCAACACTTCCGAGGAGGATTTTTTATACTCGCGGAACTTCAACCCCTCCACTGTTCCTGTTAAGCCCTCTGTATCTCAAACTAATGAAGCTGTTGATGTAATTGCCGCCAATACCAATTCAAAGTCCTGGTCTGTGGAGGAAAATGCTGTATCCATGTGGCCTGCTAGTAGTAGTAAAACCTCTGTTGTGCAAAGCAAACAACCTATGGAACTTGATCGCCAACTTAAATTCAATACTCCATCTCTTAAAGTGAACTTTACAGATTATCCCTGGTCAAGAACGGATGACAATATGAATTCGTCTTCAGACTCCGCCAAAGATTGTTCTGTCAAGACTATCTTCCCCTTCTCTAAAGGGGATATGTCTTCAAGCTTTGGTGCTGTCACTTATTCTGACAAAAAAGAGGAGAAAAAAAAGGTAGAAATTAGTGATACTAGGACATCATCTATTAAAGAGCAGGTGGGTGAACTGGGGAGGCCTATTTACTTGGTCAAGACACCAGGCAGTTCTGAACAGAAGATCATAGGCAGCTTAAGTTTTCCTCTCCTCCCTGAAAATCAGAAGGAAGAGTTTCCTAGCCTTCCTCCGGTTAAACTCAAGTCAGATGACAAGCCCTTGGTTGTTAATTGGGAGGAGAAGTTTGAGCGAGATGGACCAACCTCAAAACTCCCTGGTGCTGATAGCACTTTGCTTATTGGTTCGTATCTGGATGTACCTATCGGACAGGAAATTAACCCTTCAGGTATGAGGAGGGCTACAGGGGGCAGTTGGTTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTATCAGGATTTGCTACAGTTGGTGATGGGTTGAGTGAATCTATTGATTATCCGAATGAATATTGGGACTCCGATGAATATGATGATGATGAGGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCGCATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACTGGACATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTTTCCGGGGAACGATATCTTCAGGAAAATAATGTTGTACCTGTCACTACTACTGATGATCCTATTGGTGTAACACTTACTGAGTATGGAAGGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAACTTGATGTGTGCAGAACCGGTCTGGCGGGGCTTTGTCCCTCAGACAAATGAACTCATCATGCTAGGAGATGGGAGGGTTTTGAATGATAATCTAAGATCACGGCTAGAGGACATCAATATGGATGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTAGGGATCAACAGTGATGCTGCAGATATTGGTAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGTAGTGAAGGAGATTTAGAATATTTCCATGATCGTGATGCAGGACTTGGTGGCTCCAGACACTCTCATCATGATTTGGATAAGAAATCTACTAACAAATCAAACAAAAATAAGAACAATGAAAAGAGTGAGTCAAATAAATATGTCATAGGATGTGACAAAGATGCACCATTGCAGATGAAAACTCATGGTGATGGAAACTTTTCATTTCCCCTATCTTTGAAGGATGGTCAGATGATTCAGGCTTCCACCAATAAGTCCCTGTGGTCAAATAACGGCAACGCAGATGATGCTGATGACTGTCTTAGTGCAATTGTGGAAACTGATGACATGCTTGCTTTGTGGAGGCGAAAGAGCAGCGATTCGTCACCTGTTAAAAGTTCTAGGGATGAGAATAATGCCAACTTTGTAAGATCCACAAACTCTTCTCCAACAACAGTCTCAAATTATGGGTATTCTGAAAGAGAGCATGTGAAAGTAGAAGAAGATGAAAAGACTGGAATTGCAAGGGAAGATGATCTAGGAGCATCGCTAGAGGATGAAGAGGTAGCTGCTGTGCAAGAGCAAGTAAGGCAGATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTTCACAGAAAAAACAGGCATGTTTTTAATGTAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTTACTGAATATTTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTACATACAGGCATGGATGTTTGTGTTAAAATTATAAAAAACAACAAGGACTTTTTTGACCAAAGTCTTGACGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGCAGACAAGTATCACATTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTGTATGAGTTTCATAAATTTAATAGAGAATCAGGTGGTGAAGTGTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCTCTTCAGTTTTTGCATAGCCTTGGACTAATACACTGCGACTTGAAACCAGAGAATATTTTGGTTAAAAGCTATAGTAGGTGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAAACAGATCACCTTTGCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTTCCATATGACAAGAAGATTGATATCTGGTCTCTTGGCTGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGATCCAATTGATCAAAGTATGCTTGCAAAAGGACGCGACACATATAAGTACTTCACCAAAAATCACATGCTTTATGAAAGGAATCAGGAAACCAACCGGTTAGAATACTTGGTACCAAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTCACTTGCTAGAAGTCAACCCTAAGAAGCGGCCCTCTGCATCTGAGGCCCTGAAGCATCCATGGTTGTCATACCCATATGAACCCATATCATCTTGA 3315 0.4109 MADSVDVILDFLRRNRFTRAEAALLTEINNLPDLNANPQGLELIVKEIECGNGNAHLQATSAPSILFSNTSEEDFLYSRNFNPSTVPVKPSVSQTNEAVDVIAANTNSKSWSVEENAVSMWPASSSKTSVVQSKQPMELDRQLKFNTPSLKVNFTDYPWSRTDDNMNSSSDSAKDCSVKTIFPFSKGDMSSSFGAVTYSDKKEEKKKVEISDTRTSSIKEQVGELGRPIYLVKTPGSSEQKIIGSLSFPLLPENQKEEFPSLPPVKLKSDDKPLVVNWEEKFERDGPTSKLPGADSTLLIGSYLDVPIGQEINPSGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDEDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGERYLQENNVVPVTTTDDPIGVTLTEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGDGRVLNDNLRSRLEDINMDDDQHGSVRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFHDRDAGLGGSRHSHHDLDKKSTNKSNKNKNNEKSESNKYVIGCDKDAPLQMKTHGDGNFSFPLSLKDGQMIQASTNKSLWSNNGNADDADDCLSAIVETDDMLALWRRKSSDSSPVKSSRDENNANFVRSTNSSPTTVSNYGYSEREHVKVEEDEKTGIAREDDLGASLEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRHVFNVTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIDPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLVPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02407 1104 MobiDBLite consensus disorder prediction 680 706 - -
Gma05g02407 1104 MobiDBLite consensus disorder prediction 392 425 - -
Gma05g02407 1104 ProSiteProfiles Protein kinase domain profile. 793 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02407 1104 MobiDBLite consensus disorder prediction 671 707 - -
Gma05g02407 1104 PANTHER - 216 1102 - -
Gma05g02407 1104 Gene3D Transferase(Phosphotransferase) domain 1 847 1095 - -
Gma05g02407 1104 MobiDBLite consensus disorder prediction 562 602 - -
Gma05g02407 1104 SUPERFAMILY Protein kinase-like (PK-like) 782 1097 IPR011009 -
Gma05g02407 1104 Pfam Protein kinase domain 793 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02407 1104 Coils Coil 740 760 - -
Gma05g02407 1104 Gene3D Phosphorylase Kinase; domain 1 787 874 - -
Gma05g02407 1104 CDD PKc_DYRK_like 793 1095 - -
Gma05g02407 1104 SMART serkin_6 793 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02407 1104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Gma05g02407 1104 PANTHER DUAL SPECIFICITY PROTEIN KINASE 216 1102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02407 Gma-Chr5 44836294 44847628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02407 792 1090 MAP Kinase Gene Family AT5G19010 31.034 5.31e-29 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gma05g02407 Pkinase 6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02407 - - gmx:100797095 2162.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02407 05 44836294 44847628 Gma08g00546 08 4467153 4478312 GST
Gma05g02407 05 44836294 44847628 Gma16g01765 16 38839750 38846917 PCT
Gma05g02407 05 44836294 44847628 Gma09g01592 09 41170356 41179134 PCT
Gma16g01765 16 38839750 38846917 Gma05g02407 05 44836294 44847628 PCT
Gma09g01592 09 41170356 41179134 Gma05g02407 05 44836294 44847628 PCT