Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02399 ATGCATGCATCATGCCGCAAGTTTGTGATTCATCCTCATAACCGGTGGTACCTGGCGTGGAAGCACTTCATTCTTATATGGGCAGTGTACTCATCCTTCTTGACTCCCATGGAGTTTGGGTTCTTCCGAGGCTTGCCCCAGAAGATTTTCCTGCTGGACATGGCGGGGCAATTGTTTTTCCTCCTTGACATCCTCCTCCGGTTCTTGGTTGGCTATCACGAGGTCCAGTCCAACTCCCTCTCCTTGGTCCTGGACCCCCACAAGATCGCCCTTAGATACCTCAAGTCTTGCTTCCTCCCCGATTTTCTCTCCTGTCTCCCCTGGGACTACTTTTACAAACTCTCCTCCAACAACGAGCTCGTCCGCTATCTTCTCTTGATAAGGCTCTGCCGTGCTTTCAGAGTCACCCAATTCTTCGACACCCTCGAGAAGAACACCCGTGTCAGTTACTTGTTCTCCCGTATCCTCAAACTCTTTGTCGTTGAACTTTATTGCACCCACACTGCCGCTTGCTTATTTTACTATCTGGCAACTACCGTGCCCCCTTCCCAACACTCTTATACCTGGATCGGTAGCTTGAAGATGGGTGACTATACTTATTCTGACTTCACTCATATTGATCTTTGGAAGCGTTACGTCACCTCCCTCTACTTCGCTATTGTTACCATGGCTACTCTTGGCTACGGAGACATCCATGCCGTCAATGTCAGGGAAATGATATTTGTCATGATTTATGTCTCCTTTGACATGATTCTCGGCGCTTACCTTCTCGGCAACATCACTGCCTTGATTGTCAAGGGATCTAAGACCGAGAGATTCAGAGATCAAATGTCTCATATTGTTAACTACATCAATAAGAACAATTTGGACAAGCAGATATGTCACCACATTAAAGATCATTTGCGCTTAAAGTATCATCCAAGTTACACCGGATCTTCTGTTCTCCAGGACATACCAACCACTATCCGCACAAAGATTTCGATTAGTTTGTATGAGCAGTTCATTCAAAAAGTTTCTCTTTTCAAGGGATGCTCTTCAGGGTTTATAAAGCAGATTGCAACCAAAGTCCAGGAAGAGTTTTTCCTCCCAGGAGAATTGGTTATGGAGCAAGGAGATGTTGTAGATCAACTCTATTTTGTATATCACGGTGAGCTGCATGAGATAAGGAAGGAAGATGATGATACAGAAGAAAATACAATTACATTGCATACCTATAGTTCTTTCGGCCAGGTTTCTTTTTTTTGCAATAAGCCTCAAACTTCCATGGTTGAAGCTCATGAATTTTGCAAGGTTTTACGACTTGATAAGAAATCCTTTACTGAAATACTGAAGATATACTTTTTAGATGGTCGTATTGTCTTGAACAATCTCCTTGAGGTAAAAGACTTGAGTCTACAACGTAAGCTTTTGGAGTCAGATTTCAACCTGACTATTGGTAACATGGAAACAGAGCTGGCAATAAGGATGAATTTTGCTGCCCATGATGGTCATCTTGATCTTGTGAAACGTTTGATTGGATTTGGGGCAGATCCCAATAAGACTGATTACGATGGCAGAACACCCTTGCATATCTCAGCATCAAAAGGATATGTAGATATTTCTTCCTATCTTGTTGAGCAAGGTGTAAATATCAACTGTGCAGATAAATTTGGCACCACTCCCTTGCTTGAAGCCATCAAGAATGGACACGAAGAAGTAGCATCTATACTTGTTAACGCAGGAGCTATCTTTACCATTGATGATGTTGGCAATTTTCTCTGCATGACTGTTGCCAAGAAGGAGTTGGACCTTTTAAAAAGGGTTCTGGGTTGTGGAGTTAATCCAAATGCCAAAAATTATGATCAACGTACACCTCTTCACATAGCTGCCTCTGAAGGTTTGTTTACAATGGCGGAAGTACTTCTAGAAGCAGGAGCGAGTGTTTTATCTAAGGACAGATGGGGAAATACACCTCTTCATGAAGCTCATACCGGTGGGGATAGAAATATGATCAAAATGCTTGAAGTGGCAAAAGCTTCTCAGTTGGTTGAGTTGTCCAATAATATTCATGAAACTCAAGCAACACCAACAGATGAAATTCCGAAAAAGAGATGTATAGTATTTCCTTTCCACCCATGGGATGATCAGAAAGCGGATAGAAAAGAGGGAGTGGTCCTAACGGTTCCACAAAGCATTGAAGAGCTTATAAAGGAGGCGACAAAACATTTGGAAATTCCAAACGCTTCCTGTATTTTGTCAGAACAATGTGGCAAAATTGTTTATGTAGGCACGATTAACAATGATGAGAAGCTATTTCTAGTGAGTGAAGCACAGAATGAATGA 2322 0.4238 MHASCRKFVIHPHNRWYLAWKHFILIWAVYSSFLTPMEFGFFRGLPQKIFLLDMAGQLFFLLDILLRFLVGYHEVQSNSLSLVLDPHKIALRYLKSCFLPDFLSCLPWDYFYKLSSNNELVRYLLLIRLCRAFRVTQFFDTLEKNTRVSYLFSRILKLFVVELYCTHTAACLFYYLATTVPPSQHSYTWIGSLKMGDYTYSDFTHIDLWKRYVTSLYFAIVTMATLGYGDIHAVNVREMIFVMIYVSFDMILGAYLLGNITALIVKGSKTERFRDQMSHIVNYINKNNLDKQICHHIKDHLRLKYHPSYTGSSVLQDIPTTIRTKISISLYEQFIQKVSLFKGCSSGFIKQIATKVQEEFFLPGELVMEQGDVVDQLYFVYHGELHEIRKEDDDTEENTITLHTYSSFGQVSFFCNKPQTSMVEAHEFCKVLRLDKKSFTEILKIYFLDGRIVLNNLLEVKDLSLQRKLLESDFNLTIGNMETELAIRMNFAAHDGHLDLVKRLIGFGADPNKTDYDGRTPLHISASKGYVDISSYLVEQGVNINCADKFGTTPLLEAIKNGHEEVASILVNAGAIFTIDDVGNFLCMTVAKKELDLLKRVLGCGVNPNAKNYDQRTPLHIAASEGLFTMAEVLLEAGASVLSKDRWGNTPLHEAHTGGDRNMIKMLEVAKASQLVELSNNIHETQATPTDEIPKKRCIVFPFHPWDDQKADRKEGVVLTVPQSIEELIKEATKHLEIPNASCILSEQCGKIVYVGTINNDEKLFLVSEAQNE 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02399 773 Gene3D Jelly Rolls 311 472 IPR014710 -
Gma05g02399 773 Pfam KHA, dimerisation domain of potassium ion channel 696 766 IPR021789 -
Gma05g02399 773 SUPERFAMILY Ankyrin repeat 439 670 IPR036770 -
Gma05g02399 773 ProSiteProfiles KHA domain profile. 697 773 IPR021789 -
Gma05g02399 773 CDD CAP_ED 340 454 IPR000595 -
Gma05g02399 773 ProSiteProfiles cAMP/cGMP binding motif profile. 340 443 IPR000595 -
Gma05g02399 773 Pfam Ankyrin repeats (3 copies) 491 578 IPR002110 GO:0005515
Gma05g02399 773 Pfam Ankyrin repeats (3 copies) 591 667 IPR002110 GO:0005515
Gma05g02399 773 PANTHER POTASSIUM CHANNEL AKT1 13 765 IPR045319 GO:0005249|GO:0006813
Gma05g02399 773 PRINTS EAG/ELK/ERG potassium channel family signature 53 63 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma05g02399 773 PRINTS EAG/ELK/ERG potassium channel family signature 164 174 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma05g02399 773 PRINTS EAG/ELK/ERG potassium channel family signature 212 229 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma05g02399 773 PRINTS EAG/ELK/ERG potassium channel family signature 256 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma05g02399 773 ProSiteProfiles Ankyrin repeat profile. 614 646 IPR002110 GO:0005515
Gma05g02399 773 PRINTS Ankyrin repeat signature 518 533 IPR002110 GO:0005515
Gma05g02399 773 PRINTS Ankyrin repeat signature 630 644 IPR002110 GO:0005515
Gma05g02399 773 ProSiteProfiles Ankyrin repeat profile. 550 582 IPR002110 GO:0005515
Gma05g02399 773 ProSiteProfiles Ankyrin repeat profile. 489 516 IPR002110 GO:0005515
Gma05g02399 773 SUPERFAMILY Voltage-gated potassium channels 11 265 - -
Gma05g02399 773 Gene3D - 583 680 IPR036770 -
Gma05g02399 773 Pfam Ion transport protein 19 264 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma05g02399 773 Pfam Cyclic nucleotide-binding domain 360 444 IPR000595 -
Gma05g02399 773 ProSiteProfiles Ankyrin repeat profile. 517 549 IPR002110 GO:0005515
Gma05g02399 773 SUPERFAMILY cAMP-binding domain-like 268 458 IPR018490 -
Gma05g02399 773 PANTHER CHANNEL AKT1 PROTEIN, PUTATIVE-RELATED 13 765 - -
Gma05g02399 773 ProSiteProfiles Ankyrin repeat region circular profile. 614 646 - -
Gma05g02399 773 SMART cnmp_10 340 458 IPR000595 -
Gma05g02399 773 SMART ANK_2a 550 579 IPR002110 GO:0005515
Gma05g02399 773 SMART ANK_2a 647 676 IPR002110 GO:0005515
Gma05g02399 773 SMART ANK_2a 517 546 IPR002110 GO:0005515
Gma05g02399 773 SMART ANK_2a 581 610 IPR002110 GO:0005515
Gma05g02399 773 SMART ANK_2a 484 513 IPR002110 GO:0005515
Gma05g02399 773 SMART ANK_2a 614 643 IPR002110 GO:0005515
Gma05g02399 773 ProSiteProfiles Ankyrin repeat region circular profile. 550 575 - -
Gma05g02399 773 Gene3D - 482 582 IPR036770 -
Gma05g02399 773 ProSiteProfiles Ankyrin repeat region circular profile. 517 549 - -
Gma05g02399 773 Gene3D - 19 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02399 Gma-Chr5 44768031 44773503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02399 598 705 Ion Channels AT5G37500 29.231 1.66e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02399 K21867 - gmx:100798698 1547.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02399 05 44768031 44773503 Gma05g02399 05 44768031 44773503 ECH