Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02398 ATGGCCCGATTGAAATCGCTGAGGAGATGTTGCTGGTTGCTCCAAGAGATTCAGGACAGTGGTGAAATCAGAGCAGATGGTGGAGTATTCTCTTGTCGAAAGAAACTTAATTGTGCTAATCATATCTGTATCGAGACTTGTGGGAAAACTAGATTGGAGGAGAAACGCCACAGTTGTTTAGACCCAATTCCTACCTGTTCACAATTTCCCAGAAGTGTCGATGTGGCTCTACTTCCCGCACTGTGGAGTGTTGCAAGACAAAAATGGAAAATCAGAAATTTACTTTCTAATCCAAATAATATTCTTAATGCGGATTGGGATCCACACTTGTGTCAATTACCATGTGAATCCCTGTGCCACAGTGGTCATTGTCCACCTTGTCTTCAAACTATATTTACTGATTTGACATGCTCTTGTGGCACACCGCCTCCCTCATGTCAGCTTCCATGTTCAGTTCCTCAGCCTTGTTCGCATCCGGCCTCTCACAGCTGCCTTTTTCGAGATTGCCCTCCTTGTTCAGTGCCTGTAGCAAAAGAATGTATTGGTGGGCATGTAGTTCTTAGGAACATACCTTGTGGTTCGAAGGATATTAGATGCAATAAACTCTGTGTGAAGACCAGACAGTGCGGTTTACATGCATGTGGCAGAACATGTCACCTCCCACCTTGTGATAATCTATCTGTTGTGACATGTGGTGCTCCTAGGAGAGACTGCCGGCATACATGTATAGCTCCTTGTCACCCTTCAACTCCAAGTCCAGATACAAGATGCGAATTCCCCGTCACAATTACTTGTTCTTGTGGCCGAATAACAGAAAATGTTCCTTGTGATGCTGGTGCTAATTATAATGCTGATGTGGTACATGAAGCTTCCATTATTCAAAAGTTGCCTGTGCTTCTTCAACCTGTGGCTGCAAATGGCAAAAAAGCTCCCCTTAGACAAAGAAAACTGATGTGTAATGATGACTGTGCTAAGTTAGAGCGTAAAAGGGTTCTTGCAGATGCTTATGAGATTACCGCTCCAAATCTGGATTCTCTCCATTTTGGTGAGAATTCGATTGCTTCTGAATTGCTTGCTGACATGTTGAGAAGTGATTCTAAATGGGTTTTATCTGTTGAGGAGAGATGCAAGTTTTTAGTACTTGGCAAGAGCAGAGGAAATGATGCACATGGTCCAAAAGTCCAAGTTTTCTGTCCTATGTTAAAGGACAAAGGAGATGCAGTAAGGGTGATTGCTGAGAGATGGAAGCTTGTAGTGAATGCAGCTGGTCGGGAGCCAAAGCATTTCATAGTTGTTCATGTTACCCCAAAATCAAGAGCTCCTGCTCGTGTGCTAGGGGTTAAGGGTACTACCACTGTAAATGTGCCCCTTCCTCTTGCATTTGATCCTTTGGTTGATATGGATCCTCGAGTTGTTGTCTCTTTTCTAGACTTACCAAGGGATGCAGATATTAGTGCATTGGTGTTGAGATTTGGTGGAGGAGCACTGGCAGCATTAAAGGGAAATCCATGGAAAAAAGATGTTATTCAAGAGCTGGGTTGGAGAGAAGATGCTTGGGGTGATGAGGAGTGGGCTACTGGCTCTGCTAATGTTCAATTGCCTATTAAGAAGAAAGAAGCCCTAATATCTGCTTCAGCAAATCCTTGGAGTGTCTTAAATCAAGAATCCTCTTCAAGTTCATCTGTTGCAGCCATTAAAATTGATGGTTCTAGGAAACACTATGAAAGTAGTGTTGTCACAAAGTTGGAGCCTCGTGATGGTGGATCAAATCTAGGAGGGCAGCCTGCAGGAAACTTTGATGCTTTAGAAGGTGCTGATGTAGTAGATGATTGGGAGAAGGCTTGTGAATAG 1851 0.4349 MARLKSLRRCCWLLQEIQDSGEIRADGGVFSCRKKLNCANHICIETCGKTRLEEKRHSCLDPIPTCSQFPRSVDVALLPALWSVARQKWKIRNLLSNPNNILNADWDPHLCQLPCESLCHSGHCPPCLQTIFTDLTCSCGTPPPSCQLPCSVPQPCSHPASHSCLFRDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNKLCVKTRQCGLHACGRTCHLPPCDNLSVVTCGAPRRDCRHTCIAPCHPSTPSPDTRCEFPVTITCSCGRITENVPCDAGANYNADVVHEASIIQKLPVLLQPVAANGKKAPLRQRKLMCNDDCAKLERKRVLADAYEITAPNLDSLHFGENSIASELLADMLRSDSKWVLSVEERCKFLVLGKSRGNDAHGPKVQVFCPMLKDKGDAVRVIAERWKLVVNAAGREPKHFIVVHVTPKSRAPARVLGVKGTTTVNVPLPLAFDPLVDMDPRVVVSFLDLPRDADISALVLRFGGGALAALKGNPWKKDVIQELGWREDAWGDEEWATGSANVQLPIKKKEALISASANPWSVLNQESSSSSSVAAIKIDGSRKHYESSVVTKLEPRDGGSNLGGQPAGNFDALEGADVVDDWEKACE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02398 616 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 494 613 IPR034078 GO:0003700
Gma05g02398 616 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 15 69 IPR034078 GO:0003700
Gma05g02398 616 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 94 493 IPR034078 GO:0003700
Gma05g02398 616 SMART znfxneu3 238 267 IPR000967 GO:0005634|GO:0008270
Gma05g02398 616 SMART znfxneu3 111 129 IPR000967 GO:0005634|GO:0008270
Gma05g02398 616 SMART znfxneu3 156 174 IPR000967 GO:0005634|GO:0008270
Gma05g02398 616 SMART znfxneu3 209 233 IPR000967 GO:0005634|GO:0008270
Gma05g02398 616 MobiDBLite consensus disorder prediction 582 604 - -
Gma05g02398 616 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 494 613 - -
Gma05g02398 616 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 15 69 - -
Gma05g02398 616 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 94 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02398 Gma-Chr5 44761740 44766142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02398 K12236 - gmx:106799700 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02398 05 44761740 44766142 Gma08g00536 08 4389913 4393966 GST