Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02395 ATGCTGCCTCACAAGCACACTCTGGTGGTTGTGGCCACTGTGGCCACACTCGCGCTGGCGGCGGTGCTCGCAGCACCACAAGCAGATCTGGCCTCCGAGCGAGCTGCATTACTCTCCCTCCGTTCCTCCGTGGGAGGCCGTACCCTCTTCTGGAACGCCACCAGGGACAGCCCCTGCAACTGGGCCGGGGTCCAATGCGAGCACGGCCACGTCGTCGAGCTCCACCTCCCCGGCGTCGCTCTCTCCGGCGAAATCCCCGTCGGAATATTCGGGAATCTGACCCAGCTCCGCACCCTCAGTCTCCGTTTCAACGCCCTCAGAGGTTCCCTCCCTTCAGATCTGGCCTCCTGCGTCAACCTCCGCAACCTCTACATTCAGCGCAACTTGCTCACCGGCCAAATTCCACCCTTTTTGTTTCATTTGCCGGACCTCGTTCGCTTGAACATGGGCTTCAACAACTTCTCCGGCCCCTTTCCGTCCGCCTTCAACAACCTTACCCGTTTGAAAACTTTGTTTCTCGAAAACAACCAGCTCTCCGGCCCAATCCCCGACTTGAACAAACTCACCCTCGACCAGTTCAACGTCTCCGACAACCTCCTCAACGGCTCTGTCCCTCTTAAGCTTCAGACATTCCCTCAGGACTCTTTTCTAGGTAACTCCCTCTGTGGCCGACCACTCTCTCTCTGTCCCGGAGATGTCGCCGATCCCCTCTCGGTCGACAACAACGCCAAGGGCAACAACAACGACAACAAGAAGAACAAGCTGTCCGGGGGCGCCATAGCGGGGATTGTTGTCGGATCGGTGGTGTTTCTTCTCTTGCTTGTGTTCCTCTTGATTTTCCTGTGCAGGAACAAGAGTGCCAAGAATACCAGCGCGGTCGACATTGCCACTGTCAAACATCCTGAGACGGAGTCTGAGGTTCTTGCCGACAAGGGTGTCTCCGATGTCGAGAACGGTGGTCATGCCAATGTCAACCCTGCAATCGCTTCTGTGGCGGCGGTTGCGGCTGGGAATGGTGGTAGCAAGGCGGAAGGGAACGCGAAGAAGTTGGTGTTTTTTGGGAATGCGGCGAGGGCGTTTGATTTGGAAGATTTGCTCAGGGCTTCGGCGGAGGTTTTGGGGAAAGGGACTTTCGGGACGGCGTACAAGGCGGTGTTGGAGGCGGGGCCGGTGGTGGCCGTGAAGAGGTTGAAGGATGTGACAATTTCCGAGAAGGAATTTAAGGAGAAGATTGAGGCGGTGGGAGCGATGGATCACGAGAGTTTGGTGCCTCTCAGGGCTTACTATTTCAGCAGGGATGAGAAGCTCCTTGTCTATGATTATATGCCCATGGGAAGCTTGTCTGCCCTTTTACATGGAAACAAAGGAGCTGGTAGGACACCACTGAATTGGGAAGTGAGATCAGGCATTGCACTTGGAGCTGCCCGTGGCATTGAGTACCTACATTCACGAGGGCCTAATGTTTCTCATGGAAATATCAAGTCATCAAACATCCTCTTAACCAAATCATATGATGCCAGAGTGTCTGACTTTGGCCTTGCACACCTTGTTGGCCCCTCCTCTACCCCTAACCGTGTGGCCGGCTACCGTGCGCCGGAGGTGACTGATCCTCGCAAGGTGTCTCAGATGGCAGATGTGTACAGCTTTGGTGTGTTGCTCTTGGAACTTCTGACTGGGAAGGCACCTACCCATGCTCTCCTGAATGAGGAAGGAGTGGACCTCCCCAGATGGGTTCAATCCGTGGTTAGAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTTAGGTATCAAAATGTAGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTTGATTGTGCAGCACAATACCCTGACAAGCGCCCTTCAATGTCTGAAGTGGTAAGGAGCATACAAGAGTTGCGAAGGTCTAGCTTGAAAGAGGACCAGGACCAAATCCAACATGACAATGATATACTATTATAG 1971 0.5408 MLPHKHTLVVVATVATLALAAVLAAPQADLASERAALLSLRSSVGGRTLFWNATRDSPCNWAGVQCEHGHVVELHLPGVALSGEIPVGIFGNLTQLRTLSLRFNALRGSLPSDLASCVNLRNLYIQRNLLTGQIPPFLFHLPDLVRLNMGFNNFSGPFPSAFNNLTRLKTLFLENNQLSGPIPDLNKLTLDQFNVSDNLLNGSVPLKLQTFPQDSFLGNSLCGRPLSLCPGDVADPLSVDNNAKGNNNDNKKNKLSGGAIAGIVVGSVVFLLLLVFLLIFLCRNKSAKNTSAVDIATVKHPETESEVLADKGVSDVENGGHANVNPAIASVAAVAAGNGGSKAEGNAKKLVFFGNAARAFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFKEKIEAVGAMDHESLVPLRAYYFSRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWEVRSGIALGAARGIEYLHSRGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQMADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVVRSIQELRRSSLKEDQDQIQHDNDILL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02395 656 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Gma05g02395 656 Gene3D Transferase(Phosphotransferase) domain 1 442 655 - -
Gma05g02395 656 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Gma05g02395 656 SUPERFAMILY Protein kinase-like (PK-like) 371 635 IPR011009 -
Gma05g02395 656 Pfam Protein kinase domain 370 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02395 656 Gene3D Ribonuclease Inhibitor 144 229 IPR032675 -
Gma05g02395 656 Gene3D Phosphorylase Kinase; domain 1 334 441 - -
Gma05g02395 656 Gene3D Ribonuclease Inhibitor 32 141 IPR032675 -
Gma05g02395 656 ProSiteProfiles Leucine-rich repeat profile. 167 189 IPR001611 GO:0005515
Gma05g02395 656 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 651 - -
Gma05g02395 656 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Gma05g02395 656 PANTHER OS05G0588300 PROTEIN 2 651 - -
Gma05g02395 656 SUPERFAMILY L domain-like 48 208 - -
Gma05g02395 656 CDD STKc_IRAK 373 636 - -
Gma05g02395 656 ProSiteProfiles Protein kinase domain profile. 367 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02395 Gma-Chr5 44747677 44749986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02395 29 637 Receptor kinase-like Gene Family AT1G48480 66.023 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma05g02395 Pkinase 1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02395 - - gmx:100818955 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02395 05 44747677 44749986 Gma05g02395 05 44747677 44749986 ECH
Gma05g02395 05 44747677 44749986 Gma08g00534 08 4371761 4374541 GST
Gma05g02395 05 44747677 44749986 Gma07g00930 07 10246447 10248975 PCT
Gma05g02395 05 44747677 44749986 Gma09g01625 09 41604198 41606719 PCT
Gma07g00930 07 10246447 10248975 Gma05g02395 05 44747677 44749986 PCT
Gma09g01625 09 41604198 41606719 Gma05g02395 05 44747677 44749986 PCT