Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02386 ATGGAAGACTTACTCGGCCTTTTAAGGATTCACATCAAGCGCGGTGTCAACCTCGCCGTTCGTGATGTAAATACTAGCGATCCATACTGCGTCGTTAAGATGGGCAAGCAGAAGCTCAAGACTCGTGTGATTAAAAAGGATGTTAATCCTGAGTGGAAGGAAGATCTTACGCTTTCTGTTACAGATCCAGTTCATCCATTTATACTGGTAAATTAA 216 0.4259 MEDLLGLLRIHIKRGVNLAVRDVNTSDPYCVVKMGKQKLKTRVIKKDVNPEWKEDLTLSVTDPVHPFILVN 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02386 71 Gene3D C2 domain 1 71 IPR035892 -
Gma05g02386 71 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 68 IPR035892 -
Gma05g02386 71 Pfam C2 domain 6 66 IPR000008 -
Gma05g02386 71 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 69 IPR044562 -
Gma05g02386 71 ProSiteProfiles C2 domain profile. 1 71 IPR000008 -
Gma05g02386 71 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02386 Gma-Chr5 44679106 44679411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02386 1 69 C2H2 Transcription Factor Family AT4G05330 47.826 1.35e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02386 - - gmx:100799469 138.658