Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02381 ATGTGGATGGTTGGTTACAATGAAGGAGGCGAGTTCAACATGGCTGATTATGGATTCAATGGGAGGAAACTCAGGCCTCTCATGCCAAGGCCAGTGACATCTCCTAACAACACTTCAAACACAAACTCTCCATGCTTGAGCCGCATTCATCATGGCAACAATTTCTTTTCACAATATCACAATCTGGCATCAGTGGCAGATCAGGGAAAGAGGGAGTTCAACCCTCCACCAGTAGTGGTGAGTTCAAGGTGGAATCCAACCCCGGAGCAACTGAGAGCATTGGAGGAATTGTATAGAAGAGGGACAAGAACACCATCTGCGGAGCAAATCCAACAAATCACGGCACAGCTTAGGAGGTTTGGAAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCAAGAGAAAGACAGAAACGCCGCCGTCAAATGGAGTCAGCTGCTGAGGGTCATCACACCCGTGACTTTGATAGTACTCTTGAAAAGAAAGACTTAGGCGCAAGTAGGACAGTGTTTGAAGTTGATCAGACCAAGAACTGGGCACCCTCTACAAACTGCAGTACTCTTGCAGAGGAATCTGTTTCAATACAAAGGGCAGCAAAAGCAGCGATTGCAGAGTGTAGAACAGATGGATGGCTCCAATTCGATGAAGGAGAGTTACAACATAGAAGAAACTTTATGGAGAGGAATGCCACGTGGCATATGATGCAGTTATCTTGTCCTCCCCCTCCTACAGTTTCACCCCACCTCATAAACACATCTCCTATTACCTCTACTACTAGCATGGCCACCGCAACCACAGTAACAGCAAGACTAATGGACCCAAAGCTCATTAAGACTCATGATCTCAGCTTCTTTACTTCACCTAACAGAGAAAACGGTATTATCCACTTAAGCAGTATCAGCACCCAGGATGATAATTCTGTGGAATCTCAAACCCTTCAACTTTTTCCAACAAGGAACGCGGATCGAAGCAGTGATAACATCAACCAGCAAAAAGAGACAGAGGTTTCGGTTTCAGCGATGAATGCACCCAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAACTGA 1080 0.4509 MWMVGYNEGGEFNMADYGFNGRKLRPLMPRPVTSPNNTSNTNSPCLSRIHHGNNFFSQYHNLASVADQGKREFNPPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEGHHTRDFDSTLEKKDLGASRTVFEVDQTKNWAPSTNCSTLAEESVSIQRAAKAAIAECRTDGWLQFDEGELQHRRNFMERNATWHMMQLSCPPPPTVSPHLINTSPITSTTSMATATTVTARLMDPKLIKTHDLSFFTSPNRENGIIHLSSISTQDDNSVESQTLQLFPTRNADRSSDNINQQKETEVSVSAMNAPSQFFEFLPLKN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02381 359 SMART HOX_1 79 146 IPR001356 GO:0003677
Gma05g02381 359 PANTHER WUSCHEL, PUTATIVE-RELATED 282 359 - -
Gma05g02381 359 PANTHER WUSCHEL, PUTATIVE-RELATED 32 257 - -
Gma05g02381 359 CDD homeodomain 83 143 IPR001356 GO:0003677
Gma05g02381 359 SUPERFAMILY Homeodomain-like 82 148 IPR009057 -
Gma05g02381 359 MobiDBLite consensus disorder prediction 143 160 - -
Gma05g02381 359 MobiDBLite consensus disorder prediction 140 160 - -
Gma05g02381 359 Pfam Homeodomain 82 141 IPR001356 GO:0003677
Gma05g02381 359 ProSiteProfiles 'Homeobox' domain profile. 87 142 IPR001356 GO:0003677
Gma05g02381 359 Gene3D - 80 142 - -
Gma05g02381 359 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 32 257 IPR044555 GO:0003700|GO:0099402
Gma05g02381 359 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 282 359 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02381 Gma-Chr5 44650778 44652897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02381 1 359 Wox Gene Family AT3G18010 40.816 7.62e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma05g02381 Homeodomain 9.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02381 - - gmx:100777274 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02381 05 44650778 44652897 Gma05g02381 05 44650778 44652897 ECH
Gma05g02381 05 44650778 44652897 Gma08g00514 08 4248288 4250785 GST