Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02375 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCCAATCAATCAGAAGATGCCCAAGGGGCTACTTCATCAAAGAGCAACAAGTCCAGTGATGGTTCATCTTCATCCACTGCCCCTAAGAAGCTTTCCAATTGGTTGCATTCAGTTTCTAATAGGCAGAGTCCCAGTCCTCCATCTCCCATCCTGGCTAGAGGAGAAAGAATGGAGCCATCTGATTCAGTGAGCAGTGGTGGTTTGGATGTTGTGTCTGATTCAGCGAGGCGTGATTCGGAGTCTAGCACGTCGAGGGATCCTGAAGTGGAGGAGGAGTATCAGATACAACTGGCTTTGGAGCTGAGTGCAAAAGAGGATCCTGAGGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCCTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCCTACCGTTACTGGAATTACAACGCTCTTGGTTATGATGACAAAATCTCAGATGGTTTCTATGATCTGTATGGGATCTTGACTGAGTCAACCTCTGCAAGAATGCCTTCTCTTGTAGATCTGCAAGGAACACCAACCTCAGATGATGTCACATGGGAAGCAGTCTTGGTCAACAGGGCTGCTGATTCCAGTTTGTTGAAACTTGAACAAGAAGCCATGGAGATGGCTGTCAATTCAAGAAAAGATTTTGAAGTACTTGTAGATAGTGATTTGGTACACAAGCTTGCAATAATAGTGGCTGACTATATGGGTGGATCAGTTGAAGATCCCGAAAGCATGTCAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCTACCCTCGGTAGCATGGTTTTGCCACTTGGTTCACTGACCATTGGATTGGCTCGGCATCGCGCATTGTTATTCAAGGTTTTAGCTGACAGTTTGGGCATCCCGTGTCGATTGGTGAAAGGACTGCAGTATATGGGTTCCAATGATGTGGCAATGAACTTTGTCAAGATAGATGGAAGGGAGTACATTGTTGACCTAATGGCAGCTCCTGGAACACTTATTCCATCTGATGCTACTGGATCACACATTGAGTTTGATGATTCTTCCTTTGTAGCCAGTCCTTCATCAAGAGAGCTTGATTCGTCTCACGTAGCATCATTCAGCAGTGGGGTTGGAAGTTCATCTGAAGAAGCTTCAGACTCTGGGACTCTGGATAAAGATAATAAATCAAAGTATTTTGGCTATGCAGGGAAAGAATCCGATGTAAGCGGGCCTACTACGGGCAAGGAAGAATTGAAGAAACCATCAAATGAATCCAAAAATACCCCCTATGAGGAGAAGATCATAGTGCGAGATTCCCCTAGCAGACCTAATTATCCATATATGCATGGAAGATCTCCTTCTTGGACTGAAGGAATCAGTTCTCCTGCAGTGCGTAGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGCTGCTAAGGAGAACCCTAACTTGGCTCAAAAACTTCATGATGTTTTGCTTGAAAGTGGTGTTGTTGCACCTCCAAACTTATTTTCTGAAATTTATCATGGGCAGTTAAGTACCCTGACTGAGGCCAATTTTCCAACTGAACAAAAAGATGAAAATAAACAAGGAAGTGTGCAGCGAGAAACTAAGACTGATGACAATCTAGTTCCTGCTCGATTTTTGCCTCCTTTGCCTCACTACCGAGTTCAGCGCAAAGCAACTCCTAGCACTAGCAGTCACCTGGAGCATTCTAAGCCTGTTGATGGCTTAGGAACTGGCCTTCCTCTTGATTCAGGGGAAGCTGCTGGACAGCACATATCATCACAGGTAGAAGCAACTCAGGTAAAGTATGGAAAAAATATGCcagttgcggcagctgcagctgcagctgctgctgttgttgcatcttctatggtagttgctgtaacgaagtcaaatgctgactcgaatcttgagattcctgtagcagcagctgctactgctactgctgcagctgttgtagcaaccactgctgctgtaagtaagcAGTACGAGCAGGGCAGTCGGAGTGATGGTGATGCAGAGGGTGCTGGTTGTGAATCGAAGGGTAGTGGTGATGGAGAGCATAATGCTTTAGGAGAAAACTCAGAAGGCGAGAGAAAATCTGATAGATCAGTAAGTAATGACAGCACAAAATCTGATTCAGCGCTAGATGATGTTGCTGAGTATGATATTCCATGGGAGGAAATTGCAGTGGGAGAGCGTATTGGACTTGGATCATATGGGGAAGTTTACCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAAAAGTTTCTATATCAAGATATCTCTGGTGAATTACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTAACTCGACCTCCAAATCTTTCAATTGTTTCTGAATTTCTTCCTAGAGGGAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGCGGATGGCCCTTGATGCTGCTCGAGGAATGAACTATCTGCACAACTGCACTCCAGTGATTGTGCATCGTGATTTAAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTAGTAAAGGTATGTGATTTTGGCTTATCACGAATGAAGCACAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGACGTTTTTAGCTATGGGGTCATATTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGAGGAATGAATCCGATGCAAGTAGTTGGTGCTGTGGGTTTTCAACATCGCCGTCTTGACATTCCAGATAATGTAGACCCTGCCATTGCCGATATTATCAGACAATGCTGGCAGACTGATCCAAAGTTGAGGCCCACGTTTGCTGAAATCATGGCTGCTTTGAAGCCATTGCAGAAGCCAATTACTGTTTCTCAAGTGCATAGACCAATTGCTCAGTCATCACGAATTGCTGAGGACCCCGCAGGATAG 3051 0.4166 MKNILKKLHIMSNQSEDAQGATSSKSNKSSDGSSSSTAPKKLSNWLHSVSNRQSPSPPSPILARGERMEPSDSVSSGGLDVVSDSARRDSESSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGILTESTSARMPSLVDLQGTPTSDDVTWEAVLVNRAADSSLLKLEQEAMEMAVNSRKDFEVLVDSDLVHKLAIIVADYMGGSVEDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYMGSNDVAMNFVKIDGREYIVDLMAAPGTLIPSDATGSHIEFDDSSFVASPSSRELDSSHVASFSSGVGSSSEEASDSGTLDKDNKSKYFGYAGKESDVSGPTTGKEELKKPSNESKNTPYEEKIIVRDSPSRPNYPYMHGRSPSWTEGISSPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHGQLSTLTEANFPTEQKDENKQGSVQRETKTDDNLVPARFLPPLPHYRVQRKATPSTSSHLEHSKPVDGLGTGLPLDSGEAAGQHISSQVEATQVKYGKNMPVAAAAAAAAAVVASSMVVAVTKSNADSNLEIPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDAEGAGCESKGSGDGEHNALGENSEGERKSDRSVSNDSTKSDSALDDVAEYDIPWEEIAVGERIGLGSYGEVYRGEWHGTEVAVKKFLYQDISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVSEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNVDPAIADIIRQCWQTDPKLRPTFAEIMAALKPLQKPITVSQVHRPIAQSSRIAEDPAG 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02375 1016 Gene3D Phosphorylase Kinase; domain 1 729 813 - -
Gma05g02375 1016 MobiDBLite consensus disorder prediction 1 102 - -
Gma05g02375 1016 MobiDBLite consensus disorder prediction 527 547 - -
Gma05g02375 1016 SMART serkin_6 736 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02375 1016 MobiDBLite consensus disorder prediction 372 388 - -
Gma05g02375 1016 MobiDBLite consensus disorder prediction 372 433 - -
Gma05g02375 1016 Pfam Protein tyrosine and serine/threonine kinase 737 988 IPR001245 GO:0004672|GO:0006468
Gma05g02375 1016 MobiDBLite consensus disorder prediction 413 433 - -
Gma05g02375 1016 PRINTS Tyrosine kinase catalytic domain signature 810 823 IPR001245 GO:0004672|GO:0006468
Gma05g02375 1016 PRINTS Tyrosine kinase catalytic domain signature 849 867 IPR001245 GO:0004672|GO:0006468
Gma05g02375 1016 PRINTS Tyrosine kinase catalytic domain signature 896 906 IPR001245 GO:0004672|GO:0006468
Gma05g02375 1016 PRINTS Tyrosine kinase catalytic domain signature 915 937 IPR001245 GO:0004672|GO:0006468
Gma05g02375 1016 PRINTS Tyrosine kinase catalytic domain signature 959 981 IPR001245 GO:0004672|GO:0006468
Gma05g02375 1016 CDD STKc_MAP3K-like 742 988 - -
Gma05g02375 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 855 867 IPR008271 GO:0004672|GO:0006468
Gma05g02375 1016 ProSiteProfiles Protein kinase domain profile. 736 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02375 1016 MobiDBLite consensus disorder prediction 525 593 - -
Gma05g02375 1016 MobiDBLite consensus disorder prediction 389 403 - -
Gma05g02375 1016 MobiDBLite consensus disorder prediction 698 714 - -
Gma05g02375 1016 MobiDBLite consensus disorder prediction 670 723 - -
Gma05g02375 1016 ProSitePatterns Protein kinases ATP-binding region signature. 742 764 IPR017441 GO:0005524
Gma05g02375 1016 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1005 - -
Gma05g02375 1016 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1005 - -
Gma05g02375 1016 SUPERFAMILY Protein kinase-like (PK-like) 720 987 IPR011009 -
Gma05g02375 1016 Pfam Ethylene-responsive protein kinase Le-CTR1 141 343 - -
Gma05g02375 1016 Gene3D Transferase(Phosphotransferase) domain 1 815 999 - -
Gma05g02375 1016 MobiDBLite consensus disorder prediction 8 58 - -
Gma05g02375 1016 MobiDBLite consensus disorder prediction 84 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02375 Gma-Chr5 44601208 44610417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02375 1 1010 MAP Kinase Kinase Kinase AT1G73660 63.372 0.0 1172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma05g02375 PK_Tyr_Ser-Thr 1.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02375 - - gmx:100778331 1912.5