Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02369 ATGGGTGGTGGAGGAACACTCGTGGAAGGGATTCGACGCTTGTTTCAACGACGCGCTTCTTCTTCTTCTTCTTCTGACCATCACGACCACAACAATGTCAATGCCAATAATAGTCTCGTCTTAGTGAGAGATTTGCGCGCGCAATTGGCTTCAATTCCAAACACGCTTCACCCCGATTCCGATTCCGATTTCGATTTCGATTTCTCTACCTTGAAGCCCATCAAAGTTCCCTCACAAATCCCCTTCAGACCCTCTTCCATGGATCATCACAAAAAGGGTGCACCAGAGACAGAGTTTTTTACCGAGTATGGAGAGGCAAGTCAATATCAGATCCAAGAGGTTGTTGGAAAAGGAAGTTATGGTGTTGTGGGTTCTGCCATTGATACTCACACAGGTGAAAAGGTTGCAATCAAGAAAATCAATGATGTTTTTGAGCATGTATCTGATGCCACGCGGATCCTTAGAGAAATTAAGCTCTTGCGGTTGCTTAGGCATCCTGATATCGTGGAAATTAAGCATATTATGCTTCCTCCTTCACGGAGAGAGTTCAGGGATATCTATGTTGTGTTTGAGTTGATGGAATCTGACCTCCATCAAGTAATCAAGGCAAATGACGATCTTACTCCTGAGCACCATCAGTTTTTCTTGTACCAACTTCTTAGGGGCCTGAAATATATACATACAGCAAATGTGTTTCATCGTGATTTGAAGCCAAAAAACATTCTTGCTAACGCTGATTGCAAACTAAAAATATGTGATTTTGGGCTTGCTCGAGTTTCATTTAATGATGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTACCGTGCACCTGAATTATGTGGTTCTTTTTTCTCAAAATACACCCCTGCAATTGATATTTGGAGCATTGGGTGCATATTTGCAGAAATGCTCACTGGGAAGCCATTGTTTCCTGGGAAAAATGTTGTGCACCAATTGGATCTCATGACTGATTTGCTTGGGACTCCTCCTCCTGAGTCCATTGCAAGGATTCGAAATGAAAAGGCTAAAAGGTATCTTAATAGCATGAGGAAAAAACAACCAATTCCATTCTCCCAAAAATTTCCAAATGCAGATCCATTGGCTCTTCGTTTGCTGGAGCGCCTACTTGCATTtgatccaaaagatcgtccatcagctgaagaggcattatctgatccttacttcactggcttggcgaacatggaccgtgaaccatccactcaacccatttcaaaacttgagtttgaatttgagagaaggaaattgaccaaagatgatgttagagagttgatttatCGAGAGATTTTGGAGTATCATCCCCAGATGCTCCAGGAGTATCTTCGTGGTGGAGATCAAACTAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGCACTCCACCATTGCAGAGACAGCATGCCTCCTTACCTAGAGAGCGAGTTTGTGCTCCCAAGGATGAAAGTAAACAAAACAACGATTCTGAAAAGCCAAGTGGATCAAATCTTCAGCAGAGTCCTCCAGGTTCTGATGAGACAGGTGCTCAAAATGGAACCTCCAAACCAAACTACAGTGCACGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCTTCCAAGTGTGTAGTTTTGAAACAAAATAAAGATCCAGAGCAAGAGCCAATTACGGAGGTAAATGATGAGGCAGTGGATGGAGTGACAGGTGAGATTGCTGCCCTCCATGCTTGA 1785 0.3972 MGGGGTLVEGIRRLFQRRASSSSSSDHHDHNNVNANNSLVLVRDLRAQLASIPNTLHPDSDSDFDFDFSTLKPIKVPSQIPFRPSSMDHHKKGAPETEFFTEYGEASQYQIQEVVGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPPESIARIRNEKAKRYLNSMRKKQPIPFSQKFPNADPLALRLLERLLAFDPKDRPSAEEALSDPYFTGLANMDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPPLQRQHASLPRERVCAPKDESKQNNDSEKPSGSNLQQSPPGSDETGAQNGTSKPNYSARSLLKSASISASKCVVLKQNKDPEQEPITEVNDEAVDGVTGEIAALHA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02369 594 ProSiteProfiles Protein kinase domain profile. 109 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02369 594 SMART serkin_6 109 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02369 594 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 75 533 - -
Gma05g02369 594 CDD STKc_TDY_MAPK 108 445 - -
Gma05g02369 594 Pfam Protein kinase domain 109 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g02369 594 MobiDBLite consensus disorder prediction 479 549 - -
Gma05g02369 594 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 75 533 - -
Gma05g02369 594 ProSitePatterns MAP kinase signature. 144 247 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma05g02369 594 MobiDBLite consensus disorder prediction 499 514 - -
Gma05g02369 594 SUPERFAMILY Protein kinase-like (PK-like) 105 405 IPR011009 -
Gma05g02369 594 ProSitePatterns Protein kinases ATP-binding region signature. 115 139 IPR017441 GO:0005524
Gma05g02369 594 MobiDBLite consensus disorder prediction 515 549 - -
Gma05g02369 594 Gene3D Phosphorylase Kinase; domain 1 125 446 - -
Gma05g02369 594 Gene3D Transferase(Phosphotransferase) domain 1 195 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02369 Gma-Chr5 44559205 44564027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02369 1 593 MAP Kinase Gene Family AT1G73670 71.096 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma05g02369 Pkinase 8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02369 - - gmx:100780831 1133.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02369 05 44559205 44564027 Gma09g01643 09 41904567 41910999 ECH
Gma05g02369 05 44559205 44564027 Gma05g02369 05 44559205 44564027 ECH
Gma05g02369 05 44559205 44564027 Gma08g00502 08 4150058 4154119 GST