Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02360 ATGGATATTGAGGAGGACATCCGTTCTTTACAGCTCGATTCAGCAGCAGAAGACAATAATGGGGTGGTAAATGCAGAGGATGGAAGGCCAGAAGAAGTTGAGAAATCTGATAAGATGGATGAAGATCCAAAGCAGGATGTTGAGGCTGAGCCAAAGGCTGTTGAGGCTGAGCCAAAAGTGAAGGATAAGGAGGTTCCTTCTGTTCAAGATGAAGAAGATGAACCAGAGATGACAAAAAGACACTTGAATGTTGTTTTTATTGGTCATGTTGATGCTGGTAAGTCTACAACTGGAGGCCAGATACTTTTCCTTAGTGGTCAAGTTGATGAGCGGACTATCCAAAAATACGAGAAAGAGGCTAAGGACAAAAGTCGAGAAAGCTGGTATATGGCTTATATAATGGACACGAATGAGGAGGAGAGGGTAAAGGGAAAGACAGTTGAAGTTGGAAGAGCACATTTTGAGACTGAAACAACAAGGTTTACTATTTTGGATGCACCTGGTCACAAAAGCTATGTTCCTAACATGATTAGTGGTGCATCTCAAGCTGATATTGGAGTGTTGGTTATTTCTGCTCGGAAGGGAGAGTTTGAAACTGGATACGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAAACGCTGGGTGTGTCTAAGCTTCTTGTTGTCGTCAATAAAATGGATGAGCCTACAGTGCAATGGTCGAAAGAAAGGTATGATGAAATTGAGTCGAAGATGGTTCCATTTTTAAAGCAATCTGGATACAACGTAAAAAAAGATGTCTTGTTTTTACCAATATCTGGTCTAATGGGTGCAAACATGAAAACAAGAGTGGATAAAAGCGTTTGTCCATGGTGGAATGGACCTTGCTTATTTGAGGCACTTGACGCTATTGAAGTTCCACTGCGAGATCCCAACGGTCCTTTCAGGATGCCTATTATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGCAAAGTTGAATCTGGCAGTGTTCGTGAGGGAGATTCCTTGTTGGTCATGCCAAATAAGGATCCAGTGAAAGTTGTTGCCATATTTATTGATGAAGATCGTGTTAAACGTGCTGGACCTGGTGAAAATTTACGGATTAGATTATCTGGTGTTGAAGAAGAAGACATATTGTCTGGGTTTGTTCTATCTAGTGTTGCTAATCCAATACCAGCAGTTACCGAGTTTGTTGCTCAGTTGGTGATCCTTGAATTGCTAGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTCTGCACATCCACTCTGTGGTTGAGGAATGCGAGATTGTTGAACTCTTGCAGCAAATCGATACAAAGACAAAGAAGCCTATGAAAAAGAAAGTTTTGTTTGTGAAGAATGGAGCTGTTGTAGTGTGCCGTGTTCAGGTTAATAACTCTATTTGCATCGAGAAGTTCTCTGATTTTCCCCAGCTTGGGAGGTTCACTCTTCGCACTGAAGGAAAAACTGTTGCTGTGGGAAAAGTCACTGGTCTGTGA 1518 0.4183 MDIEEDIRSLQLDSAAEDNNGVVNAEDGRPEEVEKSDKMDEDPKQDVEAEPKAVEAEPKVKDKEVPSVQDEEDEPEMTKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDEPTVQWSKERYDEIESKMVPFLKQSGYNVKKDVLFLPISGLMGANMKTRVDKSVCPWWNGPCLFEALDAIEVPLRDPNGPFRMPIIDKFKDMGTVVMGKVESGSVREGDSLLVMPNKDPVKVVAIFIDEDRVKRAGPGENLRIRLSGVEEEDILSGFVLSSVANPIPAVTEFVAQLVILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDTKTKKPMKKKVLFVKNGAVVVCRVQVNNSICIEKFSDFPQLGRFTLRTEGKTVAVGKVTGL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02360 505 CDD eRF3_II 310 391 - -
Gma05g02360 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 314 IPR027417 -
Gma05g02360 505 SUPERFAMILY Translation proteins 302 395 IPR009000 -
Gma05g02360 505 CDD eRF3_C_III 397 505 - -
Gma05g02360 505 Gene3D Translation factors 308 393 - -
Gma05g02360 505 Gene3D - 60 303 IPR027417 -
Gma05g02360 505 Pfam Elongation factor Tu domain 2 323 389 IPR004161 GO:0005525
Gma05g02360 505 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 79 305 IPR000795 GO:0003924|GO:0005525
Gma05g02360 505 PANTHER BNAA06G12300D PROTEIN 74 499 - -
Gma05g02360 505 PANTHER TRANSLATION FACTOR 74 499 - -
Gma05g02360 505 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 135 150 IPR031157 -
Gma05g02360 505 PRINTS GTP-binding elongation factor signature 83 96 IPR000795 GO:0003924|GO:0005525
Gma05g02360 505 PRINTS GTP-binding elongation factor signature 162 172 IPR000795 GO:0003924|GO:0005525
Gma05g02360 505 PRINTS GTP-binding elongation factor signature 178 189 IPR000795 GO:0003924|GO:0005525
Gma05g02360 505 PRINTS GTP-binding elongation factor signature 222 231 IPR000795 GO:0003924|GO:0005525
Gma05g02360 505 Gene3D Translation factors 398 505 - -
Gma05g02360 505 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 399 504 IPR009001 -
Gma05g02360 505 Pfam Elongation factor Tu C-terminal domain 396 504 IPR004160 -
Gma05g02360 505 Pfam Elongation factor Tu GTP binding domain 79 292 IPR000795 GO:0003924|GO:0005525
Gma05g02360 505 MobiDBLite consensus disorder prediction 1 76 - -
Gma05g02360 505 CDD EF1_alpha 83 303 - -
Gma05g02360 505 MobiDBLite consensus disorder prediction 24 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02360 Gma-Chr5 44474794 44483251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02360 79 500 Eukaryotic Initiation Factors Gene Family AT5G60390 38.118 1.81e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02360 K03267 - gmx:100784412 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02360 05 44474794 44483251 Gma05g02360 05 44474794 44483251 ECH
Gma05g02360 05 44474794 44483251 Gma08g00490 08 4062823 4074772 GST