Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02341 ATGGGTCTTGGTTTGAAGATGAAGAGCCTGAGGCACCACCCCATGGCCTTGAAGTTACATGAGCAAGCGGGGAGCATAAGAAAGTACACTTTCATTCAGGCACATAGGGCATGGCTGCCCAAGTTTTTGATGCTGTGGATCCTTCTCATGGCTCTAATTGGCTGTTTCATCTATAGTAAAATGGATGCTGACACTAAGGTTAGAAGGAAAGAGGTGCTGGGTAGCCTCTGTGATCAAAGGGCAAGAATGCTGCAAGATCAATTCAGTGTCAGTGTCAACCATGTCCATGCCCTTGCCATCCTTGTTTCAACCTTCCATTACTACAGAACCCCTTCTGCCATTGACCAGGAAACCTTTGCAGAGTATACAGCCCGGACAGCATTTGAACGACCATTACTCAGTGGGGTGGCCTATGCACAAAGAGTAGTTAACTCAGAGAGGGGAACATTTGAGAAGCAACATGGATGGGTTATAAAGACAATGGAAAGAGAGCCTTCACTGGTTAGAGATGAGTATGCACCGGTGATATTTGCGCAAGAAACACTCTCTTACCTCGAATCTCTTGATATGATGTCCGGGGAGGAGGACCGAGAGAATATTTTGAGGGCTAGGGCCACTGGGAAAGCTGTTCTCACTAGTCCTTTCAATCTGTTGGGTTCTCATCATCTTGGTGTGGTTTTAACATTTCCTGTTTATAAATCTAAGCTCCCTCCAAAGCCGACAATGGAAGAGCGCATTAAAGCAACTGCAGGATATGTTGGAGGATCCTTTGATGTTGAGTCCCTCGTGGAGAATTTACTTGGTCAACTTGCTGGTCACCAAGCAATTTTGGTGAACGTATATGATATCACAAATTCTACTAACCCCTTAATCATGTATGGCAACCAAAACGAAGAAGGTGATATGTCTCTTGTCCATGAAAGTAAGCTTGATTTTGGAGATCCATACAGGAACCATACAATGATATGTAGGTATCACCAGAAGGCACCAACAAATTGGATAGCACTTACCACGGCATTCTTATTCTTTGTGATTCTTTTATTAGTGGGTTATATTTTATATGGTGCTGGAAATCACATTGTCAAAGTAGAGGATGATTTTCATCAAATGGAGGAATTAAAAGTCCGAGCAGAAGCAGCTGATGTTGCCAAGTCACAGTTTCTAGCTACTGTCTCTCATGAAATCAGAACACCCATGAATGGCATTCTAGGAATGCTTGGTCTGCTTCTAAAGACAGAATTGAGTTCAACTCAACGAGATTATGCCCAGACTGCTCAAGCATGTGGGAAGGCTCTGATAGCCTTAATAAATGAGGTACTTGACCGGGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAAGCAGTTCCATTTGACATTCGTTCCATACTTGATGATGTCCTTTCTCTTTTTTCTGAGAAGTCCAGGAACAAAGGTTTAGAGCTGGCGGTGTTTGTTTCTGATAAAGTTCCAGATATTGTTATGGGAGATCCTGGGAGATTCAGACAAATAGTAACAAATCTTGTTGGCAACTCTGTTAAATTCACTGAGCGAGGACATATATTTGTGAAAGTCCATCTATCTGAAAATAGTATGTCCACAATGAATGGAAAAACTGAGAAATTTATAAACAGAGGATCAGGCGAACCTGTGCATATGTCTGGTGCTTATAATTCCAAAACTTTAAGTGGATATGAAGCAGCTGATGAGCGGAACAGCTGGGACAATTTTAAGCATCTAATTGCTGATGAAGAATTTTTCTTTGATGCTTCTGTTAAAAAGGCAGCCAGTGAATCTTATGAGCAAGTCACCTTGATGGTCAGTGTGGAGGACACTGGAATTGGAATTCCTTTCTCAGCCCAAGATAGGATTTTCATGCCTTTTGTGCAGGCAGACAGCTCAACCTCTCGACATTATGGTGGTACTGGCATTGGCTTGAGTATCAGTAAATGCCTGGTTGAACTAATGGGTGGTGAGATAAGTTTCATAAGCCAACTGCAGGTTGGCAGCACATTTTCATTTACTGCAGGTTTTGGAACGATTGAGAAAAATGCAATAACTGACATGAAGAAACATAATTTGGAAGATCTGCCTTCCAATTTTAGAGGGCTTAAAGCCATAGTGGTTGATGGAAAACCTGTTAGAGCAGCAGTGACTAGATACCATCTGAAGAGACTAGGGATACAAGCTAAAGTTGCAAATAGCATCAATAAGGCTGTTTCTTTATGTGGGAAAAATGGTTCTTTGACCTCGGGATTATTTCAGCCCGATATTATTTTTGTTGAGAAAGATTCATGGGTTTGTGGAGAGGACGAGATCTTCAATGTGTGGCAACTGGACTGGAAACAAAATGGGCATATGTTTAAGATACCTCAAATGATCCTTCTTGCGACCAACATCGGTAATGCTGAATTTGATAAAGCTAAAGCTGCAGGTTTCAGTGATACTGTGATCATGAAGCCTCTAAGAGCTAGCATGGTGGCTGCTTGTCTTCAGCAAGTTCTTGGAACAGGGAAGAAGAGGCAGCATGGGAAAGACATGAAGCCTAATGGTTCCACTTTGGTACGAAGCCTTCTTTGTGGGAAAAAAATCTTAGTGGTTGATGACAATGTGGTAAACCGGAGGGTCGCTGCAGGTGCATTAAAAAATTTTGGAGCTGATGTGACGTGTGCAGAAAGTGGCAAAACTGCTCTTGAAATGCTGCAGTTGCCTCACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGGTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCAGCAGATGAATGGTGAAGGAAATGGGTGGAAAGACAAGTACCATATACCTATATTGGCCATGACAGCTGATGTAATTCACGCCACATATGATGAGTGCGTGAAATATGGGATGGATGGATACGTCTCAAAGCCTTTTGAGGAAGAAAATCTGTATCAAGCAGTTGCAAAGTTTTTCAACCCCAAGCCTACCACAGACAACAGCCTAATAGAAAATGGCAGAACTTGA 3036 0.4233 MGLGLKMKSLRHHPMALKLHEQAGSIRKYTFIQAHRAWLPKFLMLWILLMALIGCFIYSKMDADTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRTPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSERGTFEKQHGWVIKTMEREPSLVRDEYAPVIFAQETLSYLESLDMMSGEEDRENILRARATGKAVLTSPFNLLGSHHLGVVLTFPVYKSKLPPKPTMEERIKATAGYVGGSFDVESLVENLLGQLAGHQAILVNVYDITNSTNPLIMYGNQNEEGDMSLVHESKLDFGDPYRNHTMICRYHQKAPTNWIALTTAFLFFVILLLVGYILYGAGNHIVKVEDDFHQMEELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLKTELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDIRSILDDVLSLFSEKSRNKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLSENSMSTMNGKTEKFINRGSGEPVHMSGAYNSKTLSGYEAADERNSWDNFKHLIADEEFFFDASVKKAASESYEQVTLMVSVEDTGIGIPFSAQDRIFMPFVQADSSTSRHYGGTGIGLSISKCLVELMGGEISFISQLQVGSTFSFTAGFGTIEKNAITDMKKHNLEDLPSNFRGLKAIVVDGKPVRAAVTRYHLKRLGIQAKVANSINKAVSLCGKNGSLTSGLFQPDIIFVEKDSWVCGEDEIFNVWQLDWKQNGHMFKIPQMILLATNIGNAEFDKAKAAGFSDTVIMKPLRASMVAACLQQVLGTGKKRQHGKDMKPNGSTLVRSLLCGKKILVVDDNVVNRRVAAGALKNFGADVTCAESGKTALEMLQLPHNFDACFMDIQMPEMDGFQATQRIRMMETKANEQQMNGEGNGWKDKYHIPILAMTADVIHATYDECVKYGMDGYVSKPFEEENLYQAVAKFFNPKPTTDNSLIENGRT 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02341 1011 PANTHER TWO-COMPONENT HISTIDINE KINASE 24 998 - -
Gma05g02341 1011 SMART CHASE_2 110 295 IPR006189 -
Gma05g02341 1011 SUPERFAMILY CheY-like 860 996 IPR011006 -
Gma05g02341 1011 Pfam CHASE domain 113 293 IPR006189 -
Gma05g02341 1011 Gene3D - 447 681 IPR036890 -
Gma05g02341 1011 Pfam His Kinase A (phospho-acceptor) domain 383 448 IPR003661 GO:0000155|GO:0007165
Gma05g02341 1011 SMART REC_2 861 991 IPR001789 GO:0000160
Gma05g02341 1011 ProSiteProfiles Histidine kinase domain profile. 390 679 IPR005467 -
Gma05g02341 1011 CDD HisKA 383 444 IPR003661 GO:0000155|GO:0007165
Gma05g02341 1011 SMART HisKA_10 383 448 IPR003661 GO:0000155|GO:0007165
Gma05g02341 1011 Gene3D - 61 113 - -
Gma05g02341 1011 ProSiteProfiles CHASE domain profile. 110 322 IPR006189 -
Gma05g02341 1011 Coils Coil 433 453 - -
Gma05g02341 1011 CDD HATPase_EvgS-ArcB-TorS-like 500 675 - -
Gma05g02341 1011 PANTHER HISTIDINE KINASE 4 24 998 - -
Gma05g02341 1011 ProSiteProfiles Response regulatory domain profile. 704 834 IPR001789 GO:0000160
Gma05g02341 1011 Gene3D - 357 446 - -
Gma05g02341 1011 CDD REC_hyHK_CKI1_RcsC-like 863 991 - -
Gma05g02341 1011 SUPERFAMILY CheY-like 699 835 IPR011006 -
Gma05g02341 1011 SMART HKATPase_4 495 679 IPR003594 -
Gma05g02341 1011 Gene3D - 697 839 - -
Gma05g02341 1011 Gene3D - 856 1001 - -
Gma05g02341 1011 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 675 IPR003594 -
Gma05g02341 1011 Pfam Response regulator receiver domain 863 991 IPR001789 GO:0000160
Gma05g02341 1011 PRINTS Bacterial sensor protein C-terminal signature 604 618 IPR004358 GO:0016310|GO:0016772
Gma05g02341 1011 PRINTS Bacterial sensor protein C-terminal signature 622 632 IPR004358 GO:0016310|GO:0016772
Gma05g02341 1011 PRINTS Bacterial sensor protein C-terminal signature 639 657 IPR004358 GO:0016310|GO:0016772
Gma05g02341 1011 Gene3D CHASE domain 114 329 IPR042240 -
Gma05g02341 1011 ProSiteProfiles Response regulatory domain profile. 862 995 IPR001789 GO:0000160
Gma05g02341 1011 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 449 IPR036097 GO:0000155|GO:0007165
Gma05g02341 1011 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 437 674 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02341 Gma-Chr5 44328278 44336227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02341 24 1004 Histidine Kinase Gene Family AT2G01830 70.363 0.0 1385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma05g02341 HATPase_c 1.1e-29 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02341 K14489 - gmx:100789894 1987.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02341 05 44328278 44336227 Gma08g00471 08 3891806 3897504 GST