Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02335 ATGGGGGGGCAGAATCTTTCCCCAAAGGAAAGGAGTAGAGATTGGATTGGAGTTCTTATGAACAGCAGCTTTGGTTATTGTACTTATCACCATGATCTTCGATCTAATGAGATGAATGTGTTCTGCGTGGACTGTGCACTTAGGATGTGTAGGCACTGTAAGGAAGCTCATTCCCTACATAGAAGGTTTCAGATTTACAAATATTCCTACCAGGATGTCTTCCGCCATGCCGAGCTGCAGAAGTATTTTGATTGCTCCAAAATTCAGACTTACATATCCAATAATGAAAGGATTGTGCATCTCAAACCTCGGCCTTCAATCACCAAATCTAAGTCTGCTGATCTAAGTCCCGACTCTAAATACAAAGAGACCGGCATAGCAACAAGACCAAAGTCAGGGGGCACGTGTGAAGAATGTGGAAAACACTTACAAGATGAGCGTAATCGCTTCTGCTCCATTACATGCAAGATCTCAGTGCATCCAGTGGAGACCCAATACCAAGGTCAAAATCAATGTTCACCAAACCACCAAAGTGCTAGAGGCATCATCAATCCAAAACCTGAAGGCATTGACTTTACAATGAATGATAACCATAATTCAGAACCGGAGTCATCTATCTCTGAAGCTGAGCCATATGGGTGGGTTGAAGTTGTGAATTTCAGAAAGCGTCCAAGGAAAAGTATCCCTCAGAGGCCTGTCTTTGTTTTCACGTCTTAG 717 0.431 MGGQNLSPKERSRDWIGVLMNSSFGYCTYHHDLRSNEMNVFCVDCALRMCRHCKEAHSLHRRFQIYKYSYQDVFRHAELQKYFDCSKIQTYISNNERIVHLKPRPSITKSKSADLSPDSKYKETGIATRPKSGGTCEECGKHLQDERNRFCSITCKISVHPVETQYQGQNQCSPNHQSARGIINPKPEGIDFTMNDNHNSEPESSISEAEPYGWVEVVNFRKRPRKSIPQRPVFVFTS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02335 238 MobiDBLite consensus disorder prediction 107 126 - -
Gma05g02335 238 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 232 - -
Gma05g02335 238 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 232 - -
Gma05g02335 238 SMART bboxneu5 22 65 IPR000315 GO:0008270
Gma05g02335 238 SUPERFAMILY B-box zinc-binding domain 17 66 - -
Gma05g02335 238 Pfam PLATZ transcription factor 67 157 IPR006734 -
Gma05g02335 238 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02335 Gma-Chr5 44275338 44277407 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gma05g02335 PLATZ 5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02335 - - gmx:100809868 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02335 05 44275338 44277407 Gma08g00461 08 3824206 3826239 GST