Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02320 ATGGGGCGTAATCCAGGGTCGCAAGGAGAACTCGTTTCGCGAGTAATCATCTTCGATTACCTCAAGTGTTTGGGAATCATCCCCGACCAACTGCACGACCTCGAGCTTCCCTCCACCGTCGACGTCATGCGCGAGCGCGTCGAGTTTCTCCAAAAATTAGGTCTCACCGTCGACGACATTAACAATTACCCTCTTATGTTGGGGTGCAGTGTCAGAAAAAACATGATCCCCGTGTTGGGGTACTTGGAAAAAATAGGGATTGCAAGGCCCAAGCTTGGTGGATTCGTTAAGAATTACCCGCAGGTGTTGCATGCCAGTGTCATAGTTGAGCTTGCTCCTGTTGTTAAGTTCCTTAGAGGGCTTGATGTGGAGAAAGATGATATTGGTTATGTGCTGCAAAAGTACCCTGAACTTCTTGGCTTCAGTGGCTTATCTTGTTAG 441 0.483 MGRNPGSQGELVSRVIIFDYLKCLGIIPDQLHDLELPSTVDVMRERVEFLQKLGLTVDDINNYPLMLGCSVRKNMIPVLGYLEKIGIARPKLGGFVKNYPQVLHASVIVELAPVVKFLRGLDVEKDDIGYVLQKYPELLGFSGLSC 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02320 146 SMART mt_12 57 88 IPR003690 GO:0003690|GO:0006355
Gma05g02320 146 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Gma05g02320 146 Gene3D Transcription termination factor 3, mitochondrial 45 143 IPR038538 -
Gma05g02320 146 PANTHER EXPRESSED PROTEIN 8 142 - -
Gma05g02320 146 PANTHER CGI-12 PROTEIN-RELATED 8 142 IPR003690 GO:0003690|GO:0006355
Gma05g02320 146 Pfam mTERF 79 142 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02320 Gma-Chr5 44172385 44172825 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma05g02320 mTERF 5.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02320 K15032 - gmx:100809590 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02320 05 44172385 44172825 Gma08g00446 08 3726551 3728258 GST
Gma05g02320 05 44172385 44172825 Gma07g00897 07 9722022 9724222 PCT
Gma05g02320 05 44172385 44172825 Gma09g01664 09 42154830 42156468 PCT