Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02316 ATGTCATCCCCAAACTCCGTCCCTCAGTCCCACGCGCCGCTCCTTCTCCCGCGCCCCGATGCCGCCGCCCGCCTCCCCATCCTAGCGCTCCTCCTCGGCCGCcgcggccactccgccgtggtccgggagacggcggcgcgtgagctggaggagcgccgcgccgactggacctactcgaagccggtggtggcgctcgacatgacgtggaacatggcattcgtactggtctcggcggtgatgctcgcctgcaccgtcaaggagaaccccaacacgccgatccgctggtggatctgcggctacgcgctgcagtgcctcgtccacgtggccctcgtgtggctcgagtaccgcaggaggaacgacgctcccagggacgaggaatctgctgccagcctccaatacgacgacgtcaacgatagcgacgaggacgatgttggaacctccgggagttcctcttcctccggATTCACAAAACGATGTGCGTCATTGAATACCATGATTTCATTACTTTGGTGGATGGTGGGCTTTTATTGGGTTGTCTCTGGTGGTGATATTCTGCTGCAAGATGCTCCACGTTTATACTGGTTGTCTGTTGTCTTTTTGGCATTTGATGTCTTCTTTGCTATCTTTTGTGTTGTTTTGGCATGCTTGATTGGAATTGCCCTCTGTTGTTGTTTGCCCTGTATTATTGCTATTCTCTATGCTGTTGCAGGACAGGAGGGTGCATCAGAATCAGATCTCAGTATACTTCCAAAATACAGATTTCAATTGTTAAGCAATGAGGAAACACCTGGTGAGGGAGGAGGATCAATGATTCCTATGGAGACCAGCAACGGTTATTCGGTGAATGAACGAACACTTTCACCAGAGGATGCAGAATGCTGTATATGCATCTCTTCTTATGAGGATGGAGCTGAACTTCATGTTCTTCCTTGTAACCATCATTTCCATTCTACATGCATAGTGAAATGGTTAAAGATGAATGCAACTTGTCCTCTTTGCAAGTATAATATTCTCAAGGGAAATGAACAGGTGTGA 1035 0.2957 MSSPNSVPQSHAPLLLPRPDAAARLPILALLLGRRGHSAVVRETAARELEERRADWTYSKPVVALDMTWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQYDDVNDSDEDDVGTSGSSSSSGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02316 344 MobiDBLite consensus disorder prediction 135 155 - -
Gma05g02316 344 Pfam Ring finger domain 292 334 IPR001841 -
Gma05g02316 344 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 344 - -
Gma05g02316 344 ProSiteProfiles Zinc finger RING-type profile. 293 334 IPR001841 -
Gma05g02316 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 339 IPR013083 -
Gma05g02316 344 SUPERFAMILY RING/U-box 284 338 - -
Gma05g02316 344 CDD RING-H2_PA-TM-RING 292 334 - -
Gma05g02316 344 PANTHER TARGET OF ERK KINASE MPK-1 1 344 - -
Gma05g02316 344 SMART ring_2 293 333 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02316 Gma-Chr5 44156064 44159249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02316 1 343 C3H Transcription Factor Family AT1G68070 67.714 2.80e-169 473